LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi1056g00012	ATGGATTACACTTGGGATGCTTCCATTGATGAGGAAACACTGGTTAAGATATTGGAGGATTTGTCCTGCTATAAATTTGAGTTGCATGGGGAAGGTGTTTACGTGTCAGTGGTTGAAGAAGATGGAAAGATTCTATACAGTAAGAAAACACGGGAAGAATTGCAGCAAGAATATTTTTGTTCCAACAATGGTCTCCGTGAAGACATGGGTCTTAAAATGGAAGATAGGAAACATGAGCCTAAAGCTGAAACTAGGTGTCAATGCCAAGCAACCTTTTGTGCTCATGTTGACAAAATCACTGAGCGCTGGTATGCCACCGTTTTTAATGATAATCACAATCATGAGCTATTAGGACCAAAATTTTCTGGAATGCTTCATAGACATAGAAGGATGATACAAGGTGATGTAGTTCAAATGAACAGTATGATGAAGGCTGGTATTGCTCCATCACATATTTATGCTTCATTTGCCAGCCGGTGTGGAGGGTATGACAAGATTGGCTTTAGAAAAGCAGACATATATAACCAAATTCTACAGCAAAGGAGGAGGCACACTTCTGATGCTATGGCTGCATTACAATTCTTGCAAGACTTGAGTTCAGAACAATCACCCATGTACTTTGATCACACCAAGGACCAAGAAGGTAGACTACAACATTTGTTTTGGAGTGGTGGTAGAAGTCAAAAGGAGTATGAGTTATTTGGTGACGTGTTGGCATTTGATGCAACATATGGTAAGAACAAATATTTACTACCTGTTGTGATATTTTCTGGAGTGAACAACCACAATCGTACTACTATATTTGCAACTGTCGTGGTTGCTAATGAATGTGAAGAAACCTATGTTTGGTTGTTGGAGCAATTCTCAAAGGTAATGAAAG	880	0.392	MDYTWDASIDEETLVKILEDLSCYKFELHGEGVYVSVVEEDGKILYSKKTREELQQEYFCSNNGLREDMGLKMEDRKHEPKAETRCQCQATFCAHVDKITERWYATVFNDNHNHELLGPKFSGMLHRHRRMIQGDVVQMNSMMKAGIAPSHIYASFASRCGGYDKIGFRKADIYNQILQQRRRHTSDAMAALQFLQDLSSEQSPMYFDHTKDQEGRLQHLFWSGGRSQKEYELFGDVLAFDATYGKNKYLLPVVIFSGVNNHNRTTIFATVVVANECEETYVWLLEQFSKVMK	293

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi1056g00012	293	Pfam	FAR1 DNA-binding domain	46	117	IPR004330	-
	Sebi1056g00012	293	PANTHER	OS01G0519700 PROTEIN	43	292	-	-
	Sebi1056g00012	293	Pfam	MULE transposase domain	237	291	IPR018289	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi1056g00012	Sebi-Chr1056	165406	166607	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi1056g00012		FAR1	3.9e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi1056g00012	-		-	tpra:123913749	293.123