Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1056g00006 ATGCTGCCACTACTAAAGTCAGTAGTGACCCCATTGAATTGGGGTCTGGCGGCGGAGTCAATGAAGGGAAGCCACTTGGATGAAGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCGGTGGTGCGCCTCGGCGGCGAGACTCTAACGATCGCGCAGGTCGCAGCCATCGCCGGTCACGACCAAGGCGTGAGGGTGGAACTGTTTTTGAATGCTGGAATATTTGGAAATGGGACAGAGTCTTGCCACACATTGCCACATTCTGCAACTAGAGCAGCCATGCTTAAGCCATCACCAAGCTCATCAACAAGAATATTACCCCATGTTTACCACTTCGTGGTTACAATCACAGCTTCAGGAGATCTAGTCCCTCTTTCTTATATTGCTGGTTTGCTTACTGGCCGACCTAACTCCAAAGCTGTTGGACCCTCTGGAGAGGTACTTAATGCTAAGGAAGCTTTCCAATTGGCTAATATAAACTCTGACTTCTTTGAATTACAACCCAAGGAAGGTCTTGCCCTTGTTAATGGCACCGCTGTTGGTTCTGGCTTAGCTTCGATTGTTCTGTTTGAGGCAAACATATTAGCTGTGTTGTCTGAAGTTCTATCGGCTATTTTTGCCGAAGTGATGCAAGGGAAACCTGAATTTACTGACCATTTGACACATAAGTTAAAGCACCACCCTGGTCAAATTGAGGCTGCTGCTATTATGGAGCACATTTTGGATGGAAGTTCCTACATGAAAGCAGCCAAGAAGTTGCACGAGATAGATCCCTTGCAGAAGCCAAAACAAGATCGATATGCACTTAGAACTTCACCACAATGGCTTGGTCCTCTAATTGAAGTGATTCGATTCTCAACCAAGTCAATTGAGAGGGAGATTAACTCTGTGAATGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCATTACATGGTGGTAATTTCCAAGGAACCCCTATTGGAGTCTCTATGGACAACACACGTTTGGCTCTTGCATCAATTGGCAAACTCATGTTGCTCAGTTCTCTGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCAAATCTGTCCGCAAGTAGAAATCCCAGTTTGGATTATGGTTTCAAGGGAGCTGAAATTGCCATGGCATCTTATTGCTCTGAACTCCAATACCTTGCAAATCCGAAAAACAAATGAAGCTATTGAGATACTTAGGCTCATGTCTTCCACATTCTTGATTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAACCTGAAAAACTCAGTCAAGAACATTGTAAGCCAAGTTGCTAAGAAGACTCTTATCACAGGTGTCAATGGAGAACTCCACCCTTCCAGATTTTGTGAAAAGGATTTGTTGCAAGTGGTTGATAGGGAGCATGTATTTGCCTATATTGATGATCCCTGCAGTGCTACCTACCCATTGATGCAAAAACTCAGGCAAGTGCTTGTGGATCATGCATTAGCAAATGGAGAAAATGAGAAGAGTTTGAACACATCTATCTTTCAAAAGATTACAACTTTTGAGGATGAGTTGAAGACACTTTTGTCAAAGGAGGTTGAAAGTGCAAGGATTGCATATGAGAGTGGCAATTCAGTAATTCCAAACAAGATCAAAGAATGCCGATCTTACCCACTGTACAAGTTTGTGAGGGAGGATTTGGGGACAGATTTACTAACTGGAGAAAAGGTTAGGTCACCAGGTGAGGAGTGTGACAAATTGTTCTCAGCAATATGTCAAGGTAAAATTATTGATCCTCTTTTGGAATGCCTTGGAGAATGGGACGGTGCTCCTCTTCCAATTTGTTAA 1824 0.437 MLPLLKSVVTPLNWGLAAESMKGSHLDEVKRMVEEYRKPVVRLGGETLTIAQVAAIAGHDQGVRVELFLNAGIFGNGTESCHTLPHSATRAAMLKPSPSSSTRILPHVYHFVVTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKEAFQLANINSDFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMLLSSLSLSMIFTTMGCLQICPQVEIPVWIMVSRELKLPWHLIALNSNTLQIRKTNEAIEILRLMSSTFLIALCQAIDLRHLEENLKNSVKNIVSQVAKKTLITGVNGELHPSRFCEKDLLQVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALANGENEKSLNTSIFQKITTFEDELKTLLSKEVESARIAYESGNSVIPNKIKECRSYPLYKFVREDLGTDLLTGEKVRSPGEECDKLFSAICQGKIIDPLLECLGEWDGAPLPIC 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1056g00006 607 Gene3D - 420 541 IPR023144 -
Sebi1056g00006 607 Gene3D - 101 177 IPR024083 -
Sebi1056g00006 607 Gene3D - 5 68 IPR024083 -
Sebi1056g00006 607 PANTHER HISTIDINE AMMONIA-LYASE 10 67 IPR001106 -
Sebi1056g00006 607 SUPERFAMILY L-aspartase-like 10 607 IPR008948 GO:0003824
Sebi1056g00006 607 Gene3D Fumarase/aspartase (Central domain) 178 342 - -
Sebi1056g00006 607 FunFam Phenylalanine ammonia-lyase 420 541 - -
Sebi1056g00006 607 Pfam Aromatic amino acid lyase 104 338 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1056g00006 Sebi-Chr1056 100210 103155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1056g00006 11 607 Monolignol Biosynthesis Gene Families AT2G37040 63.531 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1056g00006 K10775 - gmx:100811101 906.746