Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1056g00002 ATGGCAAGTCCTACTACTCAAACTTCAAAGAAACTTGATTGTGATGTGAAGCCACCCCAGTTGGTGCTTTTTGGCCAAACAATTCTCACAGAGCAACAGATCTCTCTGAACAACTCTGTTGACACAGTGTCCAATGGAAATAATGCTGATAATAATAATAAAATGACCAAGTTTTCTGATGGTTCCAAATGCATTGCTCAAAAATGCTTCCAAGAAAATGTGGCTAGTTTGGAAAAGACAGGTCACTGTAAAGTTTTTATGGAATCAGAAGATGTAGGTAGGACTATGGACCTCTCATTGCTTGGGTCCTACGATGAACTGTACAGAAAACTGGCAGATATGTTTGGCATACAAAAATCTGAGGTACTAAGTCATGTGCTTTACCGTGATATAACTGGGGCTGTCAAACACATTGGAGATGAAAATTTCAGTGACTTCACTAAAACAGCAAGGAGGTTGACCATTCTAATGGATTCAAGCAATGAAAAAGGAGGAGAGGACTGTAGAGGAAGATAA 516 0.3934 MASPTTQTSKKLDCDVKPPQLVLFGQTILTEQQISLNNSVDTVSNGNNADNNNKMTKFSDGSKCIAQKCFQENVASLEKTGHCKVFMESEDVGRTMDLSLLGSYDELYRKLADMFGIQKSEVLSHVLYRDITGAVKHIGDENFSDFTKTARRLTILMDSSNEKGGEDCRGR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1056g00002 171 Gene3D - 76 163 - -
Sebi1056g00002 171 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 159 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sebi1056g00002 171 ProSiteProfiles PB1 domain profile. 80 163 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1056g00002 Sebi-Chr1056 25152 25751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1056g00002 13 162 B3 DNA Binding Superfamily AT4G30080 53.125 1.23e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1056g00002 - - gmx:100791442 206.838