Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1053g00005 ATGCTGCTTGCCCAAAAGGATAAGGCAGCTTTCATATTCTGTGTTGAAGACAGAGCACTCTTCTGTAAGGACTGTGATGAACCAATTCATTCAGCTGGTAGCCTTTCTGCAAACCACCAGCGATTTCTTGCTACTGGTATCCGGGTGGCTTTGGGTTCTAATTGCGCTAAAGGCAATGAAAAAAGTCATGTGGAACCATCTAATCCAAATGCACAAGAAGTTCCTGTGAAAATTCCTGCTCAGCAAGTGCCTAGCTTCCCATCCTCTTGGGCTGTTGATGACTTATTGGAATTAACAGACTTTGAATCTCCAGACAAAAAGCAATCCCTGGAGTTTGGAGAGCTCGAATGGCTAGCAGATGCTGGTCTTTTCAGTGAACAGTTTCCTCAGGAAGGTTTAGCTGCGGCTGAAGTTCCTCAACTTCCAGTAACACACTCTAGCAGCGTCACCTCATACAGAGCCCCTAAATCCTTTATGTCATACAAAAAGCCTAGGATTGAAGTTCTAGATGATGATGATGAGCACTTCACTGTGCCTGATCTTGGCTAA 549 0.4463 MLLAQKDKAAFIFCVEDRALFCKDCDEPIHSAGSLSANHQRFLATGIRVALGSNCAKGNEKSHVEPSNPNAQEVPVKIPAQQVPSFPSSWAVDDLLELTDFESPDKKQSLEFGELEWLADAGLFSEQFPQEGLAAAEVPQLPVTHSSSVTSYRAPKSFMSYKKPRIEVLDDDDEHFTVPDLG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1053g00005 182 PANTHER B-BOX ZINC FINGER PROTEIN 22 7 181 - -
Sebi1053g00005 182 CDD Bbox1_BBX-like 6 43 - -
Sebi1053g00005 182 SMART bboxneu5 6 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1053g00005 Sebi-Chr1053 130888 132799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1053g00005 6 106 Orphan Transcription Factor Family AT1G06040 56.481 4.32e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1053g00005 - - gmx:100779183 314.309