Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1051g00002 ATGGATTGCCATCAAGACTTTGCTCTGGTGGTTTACTCACTTGGTAAAAAGTGGGTTTCTACTGTGCAGAGGGAAGAAGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGTCCCTGCTCTGTTGATCAAAGCAGTTATACTTCTATTGCATCTAAAAAGCAAAAGGCTGATTTATCCATCAGCACTAAGGATAGGAAGGAAAAGCTTGGTGAACGAATTGTTGCTCTTCAGCAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCAACGGACTACATAGGCTTCCTTCATAAACAAGTTAAGCTGCTGAGTGCTCCTTACCTGGAGACTTCACCAACAACCAAGATGCAGGGTATAGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTGTCATTTACTATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCAATAAAGACTACCACTTCACCTAAATTTGAGAAGGATGTCTCACAATTTCATTGA 531 0.4237 MDCHQDFALVVYSLGKKWVSTVQREEGIDVRKMMGHKRSPCSVDQSSYTSIASKKQKADLSISTKDRKEKLGERIVALQQLVSPYGKTDTSSVLKEATDYIGFLHKQVKLLSAPYLETSPTTKMQGIEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTTSPKFEKDVSQFH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1051g00002 176 SMART finulus 61 110 IPR011598 GO:0046983
Sebi1051g00002 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 119 IPR036638 GO:0046983
Sebi1051g00002 176 Gene3D - 52 123 IPR036638 GO:0046983
Sebi1051g00002 176 CDD bHLH_AtbHLH_like 61 112 IPR045239 -
Sebi1051g00002 176 FunFam Transcription factor bHLH113 family 54 129 - -
Sebi1051g00002 176 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 51 145 - -
Sebi1051g00002 176 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 55 104 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1051g00002 Sebi-Chr1051 21665 25613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1051g00002 33 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.165 4.48e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1051g00002 - - gmx:100809747 286.189