Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi104g00027 ATGTCCATGGATCTAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTCAAGAAATGGAGAAGGATAGCCAACTCTTCAAAAACAACCACCAACACCAGCAGCACTAGCAGTAAAAGCATCAAGTTTCTTAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAAGTTCAAGCAATGCTGCAGTTCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTTAAGAGGTTCATTATACCAACTGATTATTTGGGTCATGAGGCCTTTCAGATTCTCCTGAGAGAAGCAGAGGAAGAATTTGGGTTTCAACAAACAGGTGTTTTGAGGATTCCTTGTGAAGTATCTGTCTTTGAGAGTATCTTGAAGATAGTGGAAGGAAAAAAGGACAAGTTTTCATCTCAGGAATGCAGACTCAGCATTGAAGAAATGATGGGATTCTGCTCTTTAGAAAACCAAATTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAA 513 0.3957 MSMDLKKSNKIREIVRLQQILKKWRRIANSSKTTTNTSSTSSKSIKFLKRTLSLSEREGSSSNAAVPKGYLAVCVGEELKRFIIPTDYLGHEAFQILLREAEEEFGFQQTGVLRIPCEVSVFESILKIVEGKKDKFSSQECRLSIEEMMGFCSLENQIAYSHHPQSPLCR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi104g00027 170 Pfam Auxin responsive protein 23 128 IPR003676 GO:0009733
Sebi104g00027 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi104g00027 Sebi-Chr104 1104167 1104679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi104g00027 3 170 Calmodulin-binding Proteins AT2G24400 53.403 7.60e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi104g00027 K14488 - gmx:100799598 266.159