Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi104g00014 ATGCAAAAGGACAAGGAAGCTGCTAGCAAAGAGGGGAAAGATATGGAAATGGAAACAAAGGAGGAAACCCTACCACCAGGGTTTCGATTTCATCCTACCGATGAAGAACTTATCTCTTACTATCTCATAAACAAGATTTCAGATTCTAGTTTTACTGGCAAAGCAATAGCTGATGTGGATCTCAACAAGTGTGAGCCATGGGAGCTGCCAGGAAAGGCAAAGATGGGGCAAAAGGAATGGTACTTCTTCAGTTTAAGAGATAGGAAATATCCTACGGGTGTGAGAACCAATCGAGCAACAAACACTGGGTATTGGAAAACCACAGGCAAAGACAAAGAGATATTCAACAGTGTTACTTCAGAGTTGGTTGGTATGAAGAAGACTTTGGTTTTCTACAAAGGCAGGGCTCCCAGAGGAGAGAAAACCAACTGGGTCATGCATGAATACCGCATTCATTCAAAATCAAGCTTCAGAACCAACAAGGATGAATGGGTGGTTTGCCGTGTATTCCGCAAGAGTGCTGCTGGTGCAAAGAAGTACCCTTCTTCCAACCCAACCAGAGCAGCAGTGAATCCTTATAGCTTAGAAGTTGGTACAAGCATTGTTCCACCACCAATGATGCAGTTAGGAGATCCTTCTGCTGCTCATTTCCTTTACGGAAGGAACTACATGAGCAATGCAGAGCTAGCTGAAGTTACTAGGGTCCTGAGAGGATCAACCAGTAGTACTACTATCAACCTACCACCAATGCAGCCCCATTTCAACTACCCACCACCTGGAGGAGGAGGATTCACCATTTCAGGGCTTAACTTGAACCTTGGAGGAGCAGCAGAAGCCACAAGTAGTACACAACCAATTTTGCGCCCAATGATGGCACCGCCACAGCCACAGCCACACACTATGGATTTCAGTTCCACCAATAATGGATTTCAGTATAATGGTGCAGAAATGAGCAATAATGCAAATCCTCATGCCAATAGCAGGTACATGGGTGGTATGGACCATTGCGTGGATCTTGACAATTACTGGCCTTCCTACTAA 1041 0.4496 MQKDKEAASKEGKDMEMETKEETLPPGFRFHPTDEELISYYLINKISDSSFTGKAIADVDLNKCEPWELPGKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRTNKDEWVVCRVFRKSAAGAKKYPSSNPTRAAVNPYSLEVGTSIVPPPMMQLGDPSAAHFLYGRNYMSNAELAEVTRVLRGSTSSTTINLPPMQPHFNYPPPGGGGFTISGLNLNLGGAAEATSSTQPILRPMMAPPQPQPHTMDFSSTNNGFQYNGAEMSNNANPHANSRYMGGMDHCVDLDNYWPSY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi104g00014 346 Pfam No apical meristem (NAM) protein 25 151 IPR003441 GO:0003677|GO:0006355
Sebi104g00014 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 277 - -
Sebi104g00014 346 SUPERFAMILY NAC domain 16 172 IPR036093 GO:0003677|GO:0006355
Sebi104g00014 346 FunFam NAC domain-containing protein 100-like 33 176 - -
Sebi104g00014 346 ProSiteProfiles NAC domain profile. 24 172 IPR003441 GO:0003677|GO:0006355
Sebi104g00014 346 Gene3D NAC domain 33 176 IPR036093 GO:0003677|GO:0006355
Sebi104g00014 346 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi104g00014 Sebi-Chr104 358441 361745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi104g00014 10 346 NAC Transcription Factor Family AT2G24430 55.056 4.93e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi104g00014 NAM 1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi104g00014 - - gmx:100805060 506.908