Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1049g00004 ATGAACAATTTCCAACAATATCGTCATATCTCAGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACAGAACAAGGGGATTGTTCAAAATTTAAGGGAAATATCCCACATTGCTGTAAAAAGGATCCAACAGTTGTAGATTTACTTCCTGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGTGTGCTCAGCTCATGGGCACAGGATCCAACTAATGCAGTTGCAGCATTTCAAGTCAGTGTGGGTAGAGCTGGTACCACTAACAAAACTGTCAGAGTGCCAAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACATGCGGGCCAGCAAAAATTGTGAAACCCACTCGTTTCATACAGCCAGATAAAAGGAGAGTGACTCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTCTCCCTTTCATCTTTCTATAATGATACTGTTGTACCATGCCCAACATGTGCATGTGGCTGTCAGGGCAACTCATCTCAATCAGGGAACTGTATAGATCCAGATTCACCACATTTGGCATCAGTTGTTTCCAACACTGATAAGAATAGTATTACACCTTTGGTTCGATGCACTAATCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTATTGGCGTGTGAAGGTCACTATTACTAATTTCAATTATAGGATGAATTATTCTGATTGGAACTTGGTTGTCCAACACCCAAACTTTGACAATCTGACCCAAATTTTCAGTTTCAACTACGGGGCATTAACTCCCTACGGGTCAATAAATGATACAGCAATGCTGTGGGGAATTAAGTTCTACAATGATTTACTCATGCAAGCTGGCCCTCTTGGTAATGCACAGTCAGAGCTACTTTTCCGAAAGGAAAAGGCAACATTTACTTTTGATAAGGGTTGGGCTTTTCCTCGGAGGCTCTATTTCAATGGTGACAACTGTGTGATGCCACCACCAGATGCTTATCCATGGTTACCTAATACTGGTTCCAAGCAACAGGTTTCCCTGCTTGCTTTGATAATGACTTCCTTGGTAACCTTGGTATTTTATTCATATGCTTGA 1173 0.4228 MNNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVAAFQVSVGRAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVPCPTCACGCQGNSSQSGNCIDPDSPHLASVVSNTDKNSITPLVRCTNHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYSDWNLVVQHPNFDNLTQIFSFNYGALTPYGSINDTAMLWGIKFYNDLLMQAGPLGNAQSELLFRKEKATFTFDKGWAFPRRLYFNGDNCVMPPPDAYPWLPNTGSKQQVSLLALIMTSLVTLVFYSYA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1049g00004 390 PIRSF COBRA 1 390 IPR006918 GO:0010215|GO:0016020
Sebi1049g00004 390 PANTHER PROTEIN COBRA 1 380 IPR006918 GO:0010215|GO:0016020
Sebi1049g00004 390 Pfam COBRA-like protein 1 158 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1049g00004 Sebi-Chr1049 61125 63133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1049g00004 3 386 COBRA Gene Family AT3G02210 80.000 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1049g00004 - - gmx:100783820 758.829