Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1049g00001 ATGGCTGCTTCTTCCGAGATTAATTGGGACAGGCTAGATAAAACAAAGTTCTATGTCGTTGGAGCTGGACTCTTTACTGGTGTTACTGTGGCACTATACCCAGTCTCTGTTGTGAAGACTAGGCTGCAGGTTGCTTCAAAGGATACCCTGGAGAGAAATGCATTTTCTGTTGTAAAGGGATTACTTAAAACGGATGGCATCCCTGGTTTGTATAAAGGGTTTGGCACGGTCATCACTGGTGCAATTCCTGCCAGAATCATATTCCTCACTGCCCTAGAGACCACAAAGGTGGCTTCCTTCAGGATGCTTGAGCCATTCAAATTATCTGAAACTACCCAGGCTGCCATAGCAAATGGAGTTGCAGGCATGGCATCATCGCTTTTGTCACAAGCTGTGTTTGTTCCAATTGATGTGATTAGCCAAAAATTGATGGTGCAAGGATACTCAGGCCATACCCAGTATAGTGGGGGTTTGGATGTAGCTCGTAAGGTGTTAAGGTCTGAGGGCGTCCGAGGATTATATAGAGGGTTTGGTCTATCTGTTATGACTTATTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAACGCTTCATGTGGAGATTCTTGGGAGATGGTAAACATGAGAAGGACACTCCTAGTCTGTCTAAGATTATTTTGGCTCAGGCTGCTGGAGGGATTATTGCTGGGGCCACTGCATCTTGCATTACAACCCCATTGGATACTATCAAGACACGGTTACAGGTGATGGGACATGAAAAGAGAATCACTGTAAAACAAGTTGTTAAAGACTTAATCAAGGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGCACTTCGATGATATTGGCTTATGAATATCTGA 907 0.4421 MAASSEINWDRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERNAFSVVKGLLKTDGIPGLYKGFGTVITGAIPARIIFLTALETTKVASFRMLEPFKLSETTQAAIANGVAGMASSLLSQAVFVPIDVISQKLMVQGYSGHTQYSGGLDVARKVLRSEGVRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFMWRFLGDGKHEKDTPSLSKIILAQAAGGIIAGATASCITTPLDTIKTRLQVMGHEKRITVKQVVKDLIKEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1049g00001 302 PRINTS Mitochondrial carrier protein signature 229 251 IPR002067 GO:0055085
Sebi1049g00001 302 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085
Sebi1049g00001 302 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085
Sebi1049g00001 302 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 302 - -
Sebi1049g00001 302 Gene3D Mitochondrial carrier domain 18 302 IPR023395 -
Sebi1049g00001 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Sebi1049g00001 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 302 IPR018108 -
Sebi1049g00001 302 FunFam Mitochondrial substrate carrier family protein 18 302 - -
Sebi1049g00001 302 SUPERFAMILY Mitochondrial carrier 10 302 IPR023395 -
Sebi1049g00001 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Sebi1049g00001 302 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Sebi1049g00001 302 Pfam Mitochondrial carrier protein 223 301 IPR018108 -
Sebi1049g00001 302 Pfam Mitochondrial carrier protein 22 97 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1049g00001 Sebi-Chr1049 2429 7750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1049g00001 7 302 Chloroplast and Mitochondria Gene Families AT5G15640 78.261 2.34e-171 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1049g00001 K15121 - gmx:100819519 514.998