Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1048g00008 ATGGCCTTTGAGGAGTCTGAGCTGGTGGTTCCTGAGCTAGAAAGAGAGGAAAACTTGATTGCTGCAGCAAGACACATAGTGAGGGCATTAGGGTCAAAGAAGAATCTCACTAATAATGCCAAGAAAATTCTAGCAGATCTTGGCACCCAGTTGTCCTCCATGACCAAAGTCAGTGAGAAGGAGGAGGTGGGGATCCATGCCTTTGAAGATAGGCTTGATGCAATTCAGGTGATAATCATGAGATGGGAGGAAGACCAGTCTATGATTTGGGATTCTGGAGAAGCATCTGAATATCTGAATGCAGCAGAAGAAGCTCATGGATTGATTGAGAAGTTGGAGAGGTTACATTTGAGCAAAGAGGACCAAGGGTATAAGCTTTTGCATAGGGCTTATAGTGTTCTTCAAACAGCTATGTCAAGGCTTGAAGAGGAGTTCAGAAACTTGCTTATCCAGAACAGACAACCTTTTGAGCCTGAATATGTGTCTTTCAGATCAAATGAAGAAGATATTGCTGATGAGAGCTCTGTAGTATCTTTAGGTGATGACTCAGTTGAGGACTCATTCAGAAGAGACAGTGTCAGCAGAGCCTCAGAGGAGCATATCCTTGATTTAGTTCATCCACATGTGATCCCACATCTCAGGTGTATTGCAAACTTAATGTTTACTTGTAATTATGACCAAGAATGTTCCCATGCTTATACCATTGCCCGAAGGGATGCCTTAGATGAGTGCCTCACCATTCTTGAAATGGAAAGGCTTAGCATTGAAAATGTCTTGAGAATGGAGTGGGGTACTTTACATTCCAAAATCAAAAGGTGGATTTGGGCTGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTCAGTGACCAAATTTTTGGGGAAGGGGAACCTGTTAGTTTAGTTTGTTTTGTTGATGCATCCAAGGCTTCTATATTGCAGCTTCTGAATTTTGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAAAAATTGTTTAAAATTCTTGACATGTATGAGGTTCTGGCAAGCCTCATGCCAGACATTAATGCCTTGTATTCAGATGAGGTTGGTTCTTCTGTTAGACTTGAATGTCATGAGGTTCTAAAGAGACTAGGAGATTGTGTGAGGGCAACATTTCTTGAATTTGAAAATGCCATTGCATCAAATGTGTCATCATCCCCTTTTGTAGGTGGTGGCATCCATCCTTTGACAAGATACGTCATGAATTATGTCACAACTCTCACTGACTACAGTGAAACACTTAATCTGCTTCTTCTGAAGGACCAAGAAGAACAAGATCCAATTTTGCAGTCACCTGACATGAGCCCAGGTACAGAAGAGGACACCAAAAGCCAGGGGTCTCCAGGTAGAGTTTCCACAATGACCATCCACTTAAGATCAGTGGCTTCAATCTTGGAATGCAACCTTGATGACAAGTCAAGGTTATACAAAGAAGCATCATTGCAGCACTTGTTCTTAATGAACAACATACATTACATGGCTCAAAAGGTTAAAGGGTCTGAGCTTAGGTTGATATATGGAGATGAATGGATCAGAAAACGCAACTGGAAGTTCAGGCAGCATGCAATCAATTATGAGAGAGTTAGTTTGAGTTCCATTCTGTCCTTGCTTAAGGATGAAGGCATTCAAATTCCAGGTACAAGTTCTATCTCAAAAAGTCTTCTTAAGGACAGGTTAAGGAGCTTCTACATTGCCTTTGAGGATCTTTATAGGAACCAAACAGCTTGGTATATCTCAGATGTTCAGCTTCGTGAAGAATTGAGGATCTCTCTATCCCTCAAAGTAATCCAGGCTTATAGGACATTTGTAGGGAGACATAGTAATTATATAAGTGAGAAATACATTAAATATACTCCTGATGATTTACAAAATTATCTTTTGGATTTCTTTGAGGGAACTGCAAAATCATTGCAAAACCCCCATAGAAGGTGA 1965 0.4102 MAFEESELVVPELEREENLIAAARHIVRALGSKKNLTNNAKKILADLGTQLSSMTKVSEKEEVGIHAFEDRLDAIQVIIMRWEEDQSMIWDSGEASEYLNAAEEAHGLIEKLERLHLSKEDQGYKLLHRAYSVLQTAMSRLEEEFRNLLIQNRQPFEPEYVSFRSNEEDIADESSVVSLGDDSVEDSFRRDSVSRASEEHILDLVHPHVIPHLRCIANLMFTCNYDQECSHAYTIARRDALDECLTILEMERLSIENVLRMEWGTLHSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVSLVCFVDASKASILQLLNFGEAMSIGPHQPEKLFKILDMYEVLASLMPDINALYSDEVGSSVRLECHEVLKRLGDCVRATFLEFENAIASNVSSSPFVGGGIHPLTRYVMNYVTTLTDYSETLNLLLLKDQEEQDPILQSPDMSPGTEEDTKSQGSPGRVSTMTIHLRSVASILECNLDDKSRLYKEASLQHLFLMNNIHYMAQKVKGSELRLIYGDEWIRKRNWKFRQHAINYERVSLSSILSLLKDEGIQIPGTSSISKSLLKDRLRSFYIAFEDLYRNQTAWYISDVQLREELRISLSLKVIQAYRTFVGRHSNYISEKYIKYTPDDLQNYLLDFFEGTAKSLQNPHRR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1048g00008 654 SUPERFAMILY Cullin repeat-like 68 642 IPR016159 -
Sebi1048g00008 654 Coils Coil 95 115 - -
Sebi1048g00008 654 Coils Coil 131 151 - -
Sebi1048g00008 654 MobiDBLite consensus disorder prediction 438 461 - -
Sebi1048g00008 654 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 643 IPR004140 GO:0000145|GO:0006887
Sebi1048g00008 654 Gene3D Exocyst complex component Exo70 79 650 - -
Sebi1048g00008 654 MobiDBLite consensus disorder prediction 439 461 - -
Sebi1048g00008 654 Pfam Exo70 exocyst complex subunit 271 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1048g00008 Sebi-Chr1048 59939 61903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1048g00008 12 654 EXO70 exocyst subunit family AT3G29400 48.640 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1048g00008 K07195 - gmx:100799102 1022.31