Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1048g00001 ATGGCACAGTCAACATCTCTCAAGCTTCATCAACTCTGTTCTCTCTCACCGCCACATGAAACCACCCCAATCTCTCTTCCCTTCACTTTCTTCGACTCACACTGGCTAAGACTCCCTCCTGTTGAGCGTCTCTTCTTCTACGAATACCCAAACCCAACCTCTTCCTTCTTTGACTCTGTTCTTCCAAATCTCAAACACTCCCTTTCACTCACTCTCCAACACTTCCCCCTTCTCGCCGGTAACATCATCTGGCCCACTCAATCACCCCACCCCATCATCAACTACGTCCCTGGCGATGCCGTCCCTTTCACAGTAGCCGAATCCAACGCTGATTTCAACCATCTCTGCTCCAATCTCTGTCAAGTTGACCAAAGACTCCCCTTAATCCCTCGCTTGAAAATTTCCCATGAACAAGCATCTATTTTAGCACTTCAAGTCACTGTTTTCCCGAACTCTGGATTTTGTATTGGGATAACCACACACCACGCAGCTCTTGATGGGAAATCTTCAACTCTGTTTCTTAAAGCATGGGCCTTTATTTGCTCTAACCTTAAAGGGGACCCTTCACCCGTGTCTCTATCATTACCTGAAAATCTAACACCTTTTTTTGACAGATCAGTGATAAAAGACCCTACAGGGATCAACGAGGTTTATCTCAACTCGTGGTTGACTTACGGTGGAGAAACCAACAATCGAAGCTTGAAGGTGTGGGAGACAATTAGTGGAACTCAGACAGATGCGGTTAAAGGTTTGTTTGAATTGACCCCTTCACATATCCAAAAGCTTAAGAAACATGCACAATCCAAGGTTAAAAACAAGGTTCGCTTATCAACATTTTCGGTTACATGTGCTTATTTGTTGGCATGTGTGGTGAAAGTAGACCAACCAAAATCGAATAGAGTAGCTTTTGTGTTCAGTGTGGATTGTAGGCCTCGTTTGGAGCCTCCAATTAAGCCAACTTATTTTGGGAATTGTATTGTGTCCCAGTTGGTTGTGGCTGAGACAAGGGCAATATTAGGGGATGATGGATTTATCAATGCCCTTGAGGGGATCACTGATTTGTTGAGTAGTTTGGAGAATGGGGTGCTGAATGAGGCAGAGAATTGGATGACAAAGATACAATCTGTAATGGGTGATAGGCTATTTTCTACTGCAGGGTCACCTCGGTTTGAGGTCTATAGTATTGATTTTGGATGGGGAAGGCCTAAAAAGGTGGATGTAACTTCCATAGACAAAACAGGAGCATTTTCTCTTTCGGAAAGTAGGAACAATGATGGTGGAGTTGAGATTGGTTTGGCGTTGAACAAGTCTCAAATGGAGACTTTTGCTGAACTTTTTGCTCAAGGACTTGAATCCTTGTAA 1362 0.4391 MAQSTSLKLHQLCSLSPPHETTPISLPFTFFDSHWLRLPPVERLFFYEYPNPTSSFFDSVLPNLKHSLSLTLQHFPLLAGNIIWPTQSPHPIINYVPGDAVPFTVAESNADFNHLCSNLCQVDQRLPLIPRLKISHEQASILALQVTVFPNSGFCIGITTHHAALDGKSSTLFLKAWAFICSNLKGDPSPVSLSLPENLTPFFDRSVIKDPTGINEVYLNSWLTYGGETNNRSLKVWETISGTQTDAVKGLFELTPSHIQKLKKHAQSKVKNKVRLSTFSVTCAYLLACVVKVDQPKSNRVAFVFSVDCRPRLEPPIKPTYFGNCIVSQLVVAETRAILGDDGFINALEGITDLLSSLENGVLNEAENWMTKIQSVMGDRLFSTAGSPRFEVYSIDFGWGRPKKVDVTSIDKTGAFSLSESRNNDGGVEIGLALNKSQMETFAELFAQGLESL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1048g00001 453 Gene3D - 244 453 IPR023213 -
Sebi1048g00001 453 Pfam Transferase family 19 444 - -
Sebi1048g00001 453 SUPERFAMILY CoA-dependent acyltransferases 251 452 - -
Sebi1048g00001 453 Gene3D - 8 234 IPR023213 -
Sebi1048g00001 453 PANTHER - 7 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1048g00001 Sebi-Chr1048 3071 4432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1048g00001 44 446 Monolignol Biosynthesis Gene Families AT5G48930 25.416 1.59e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1048g00001 - K13264 gmx:100127365 607.06