Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1044g00009 ATGGTTTTCTCTGCTCCACCAGCGAGTGACACCGAATTCCACCGTGGTCTTGAGATGGAGGCTCTTGAGGGATCAAAATCCTATGTCTCCCTTCCTGTCTCCCCCAATCAGAAGTTGACAACTCAAATAAAATTTCCACAGGTGTCTTCTTCTTCTATTGCTGCAACTACCATCACTTCGTTATCATCTGCATCCTCTGCGATTGGTTTATCTTCTGCTGCTACAATTGCTGTGAATTCTTCTGTGTTTGGCTCGGCGTTTGGAGCTCTTGCTCCATCCTCTGCGTTGCTCTCTGCCTCACTCCAACCAAAAATTTATCCTCATTCTGTTTCTTTTCCGTTCACGAATTTGTTCTTTGGTGCTGATATCTGCAAAGGCTCCACAACAAAACTGGAATGGAATCCATCACCAGAACCTTTCCACTTTGGAAGCTTTGGTTCTCTGGATCTTCACCGCGAAGAGGAGGACGCTTCCACCAGCGAGGACGAGGACACTGGAATAGTTCAAGTCACTCCGATCATCAGACTTGAAGAGGTCGCTCTCTCCACTGGCGAAGAGGATGACGAACCTACTCTCGACCTCAAAACGAAGCTGCACCGTTTTGACAAGGACGAAAACCATTGGAAGGAGCAAAGAGTCTGCACTGTGAAGATCCTGAACACCAAAGTAGTTTGGGACTCTGTTTCAGATTTAAACAAGAGTAGCGATGTGGAAAATGTTAGTGGACTTGATCACTGCATTTGGATTTCATCAGAATTGAAAGAGCTGAATGATGATTGTAAGCATTTTGAGTCTTACATGCAATCTCTGAGTAATGTGATTGTTGGTAATTATATTGCATGGCAACTGTTTGATGAAATGGTTGTTAGAGATATTATGTCTTGGAGCTCTACAACCACTGCATACTTTTATGTGGCTTGTCTGTATAATGCTAGTCTCCTTGAGAATTTGAGTGTGGAAGATTGGTGGTGGTGGTGGAAGGCTTTGTTTACTTTAGGTTCTGCTGCTCTTTATGTTATCTTGTACTCCATTATTGATGTTATGATTGCTGGGAAGGTTGTTGTTGTGTATGGATATGGAGATGTTAGCAAGGGTTGTTTTGCTGTCTTGAAGCAAGTTGTTGCTCGTATAATCGTGGATTGCATGAGGCTTGCTATCAAATTGCTGATTTCTGGGGAAAAGAAAATCTGTGATCAAGTATTTGATGGTGTTGATTCCTTGAGAACTCAATGTTTTGCTGAAGTAACTGCTAGCAGTGTGTCTATGCTTCTTAGTTTTGGAAAGGCTATTGCCAAAAGAAAGAGGTCACCTGAAAAATTATTTGTTCTTCTAGACATGTATGAGAGAGAACTTCAGCCAAGGATAGAAAGACTGTTTGAAAGTAAAGCTTGCACTGAAATGTGGGAAGTTGATTTCAAGTTGATTGGGGAAGCCAATAGGATGTTGAGTGACCAAGCAAATCGATCCTTGTATGACATCAAGCTTAAAGGCTTTGTGAGAATTGCGGCACCTAAGACCTCATCCACTCACTTAAATGAAATTTTAAAATTTAAGGACAGTTTAAATGAATGGGACAGTATGGTTGGTGATGGTGACTGTGGATCAACTATGTATAACGGTGCAAAGGCAATTCTTGAGGATGTCAAAAATTACCCTTTGAATGATGCTGCAGAAACTGTCAGTGAAATTGGATCATTAATTAGAAGAGCAATGGGAGGAACAAGTGGGATCAAAGTTTTATATCTTTTTAGAGATATGCTCAGGCAGGGTGCTTGTCAGCAAAATGAGTTTATATTTGGCAGTGTTTTCAGTGCTTACAGCAGCCTTCTGGAACCATCATATGGAAGGCAAATACATGGATTGTGTGACCATTTCATGCCTGTGCATTCTATTGTGTATTCTCGGTTGGAAGGCTACATTTGCTGA 1926 0.4159 MVFSAPPASDTEFHRGLEMEALEGSKSYVSLPVSPNQKLTTQIKFPQVSSSSIAATTITSLSSASSAIGLSSAATIAVNSSVFGSAFGALAPSSALLSASLQPKIYPHSVSFPFTNLFFGADICKGSTTKLEWNPSPEPFHFGSFGSLDLHREEEDASTSEDEDTGIVQVTPIIRLEEVALSTGEEDDEPTLDLKTKLHRFDKDENHWKEQRVCTVKILNTKVVWDSVSDLNKSSDVENVSGLDHCIWISSELKELNDDCKHFESYMQSLSNVIVGNYIAWQLFDEMVVRDIMSWSSTTTAYFYVACLYNASLLENLSVEDWWWWWKALFTLGSAALYVILYSIIDVMIAGKVVVVYGYGDVSKGCFAVLKQVVARIIVDCMRLAIKLLISGEKKICDQVFDGVDSLRTQCFAEVTASSVSMLLSFGKAIAKRKRSPEKLFVLLDMYERELQPRIERLFESKACTEMWEVDFKLIGEANRMLSDQANRSLYDIKLKGFVRIAAPKTSSTHLNEILKFKDSLNEWDSMVGDGDCGSTMYNGAKAILEDVKNYPLNDAAETVSEIGSLIRRAMGGTSGIKVLYLFRDMLRQGACQQNEFIFGSVFSAYSSLLEPSYGRQIHGLCDHFMPVHSIVYSRLEGYIC 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1044g00009 641 Gene3D - 505 604 IPR036117 GO:0004371|GO:0006071
Sebi1044g00009 641 SUPERFAMILY Cullin repeat-like 372 489 IPR016159 -
Sebi1044g00009 641 Gene3D Exocyst complex component Exo70 359 494 - -
Sebi1044g00009 641 SMART ranbd_3 170 270 IPR000156 GO:0046907
Sebi1044g00009 641 ProSiteProfiles Ran binding domain type 1 profile. 169 240 IPR000156 GO:0046907
Sebi1044g00009 641 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 345 380 IPR015878 -
Sebi1044g00009 641 Gene3D - 119 236 IPR011993 -
Sebi1044g00009 641 ProSiteProfiles DhaL domain profile. 501 641 IPR004007 GO:0004371|GO:0006071
Sebi1044g00009 641 Pfam DAK2 domain 528 586 IPR004007 GO:0004371|GO:0006071
Sebi1044g00009 641 PANTHER EXOCYST COMPLEX PROTEIN EXO70 300 486 IPR004140 GO:0000145|GO:0006887
Sebi1044g00009 641 SUPERFAMILY PH domain-like 172 222 - -
Sebi1044g00009 641 Pfam Exo70 exocyst complex subunit 382 469 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi1044g00009 641 SUPERFAMILY DhaL-like 511 611 IPR036117 GO:0004371|GO:0006071
Sebi1044g00009 641 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 345 380 IPR036291 -
Sebi1044g00009 641 Pfam RanBP1 domain 181 254 IPR000156 GO:0046907
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1044g00009 Sebi-Chr1044 91410 93876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1044g00009 361 469 EXO70 exocyst subunit family AT5G52340 63.063 1.65e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1044g00009 K07195 - gmx:100779774 149.443