Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi103g00046 ATGGTTCTCCCTGTTGCTGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGCACTTGCTGGCCACGAGAATGTGGTTCAGTTCTATAATGCTTTTGATGATGATTCATACGTGTACATAGTTATGGAGTTATGTGAAGGTGGAGAACTGTTAGATCGGATATTGTCCAAGAAAAACAGCCGTTATACTGAAAAAGATGCAGCTGTGGTTGTTAGGCAGATGCTCAAGGTTGCGGCTGAGTGTCATTTACATGGTTTGGTACACCGCGACATGAAACCAGAGAATTTTCTTTTCAAATCAACTAAAGAAGATTCACCTTTAAAGGCTACAGATTTTGGGTTGTCAGATTTCATAAAACCCGGAAAGAAGTTTCATGATATTGTTGGCAGTGCTTATTATGTTGCACCTGAAGTGTTAAAACGGAAATCAGGCCCTCAATCAGATGTCTGGAGTATTGGTGTTATTACATACATATTGCTATGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGTAACAAGCCTGATTTCCACCGGAAACCGTGGCCAACTATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGCTAATAAAGGATCCTCGGGCAAGATTAACTGCTGCTCAAGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAAGCATTGGAGATTCCTATTGATATATCTGTCCTGGGCAACATGCGGCAGTTTGTGACATATAGTCGATTGAAACAATTTGCCCTGAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATCTGAAAGATCAATTTGATGCAATAGATGTGGACAAAAATGGTTCAATTAGCCTGGAAGAGATGAGACAGGCTCTAGCTAAAGATCTTCCTTGGAAGTTGAAAGAATCACGTGTTCTAGAGATACTGCAAGCGATAGACAGCAACACAGATGGGCTAGTGGATTTCACTGAATTGTGGCAGCTACGATACATGTGCATCAATTGGAGGAACATGACTCTTATAAGTGGCAGCAACGGTCACATGCTGCTTTCCAGAAATTTGACTTGGATAAAGATGGCTATATCACTCCAGAGGAACTTAGAATG 1121 0.4148 MVLPVAVEDVKREVKILKALAGHENVVQFYNAFDDDSYVYIVMELCEGGELLDRILSKKNSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFHRKPWPTISNAAKDFVKKLLIKDPRARLTAAQALSHPWVREGGEALEIPIDISVLGNMRQFVTYSRLKQFALRALASTLNEEELSDLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTELWQLRYMCINWRNMTLISGSNGHMLLSRNLTWIKMAISLQRNLE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi103g00046 373 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi103g00046 373 SUPERFAMILY Protein kinase-like (PK-like) 8 246 IPR011009 -
Sebi103g00046 373 Gene3D Transferase(Phosphotransferase) domain 1 51 235 - -
Sebi103g00046 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Sebi103g00046 373 SMART serkin_6 2 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi103g00046 373 Gene3D Phosphorylase Kinase; domain 1 4 50 - -
Sebi103g00046 373 ProSitePatterns EF-hand calcium-binding domain. 318 330 IPR018247 -
Sebi103g00046 373 CDD STKc_CAMK 1 224 - -
Sebi103g00046 373 ProSitePatterns EF-hand calcium-binding domain. 281 293 IPR018247 -
Sebi103g00046 373 Pfam EF-hand domain pair 271 330 IPR002048 GO:0005509
Sebi103g00046 373 ProSiteProfiles EF-hand calcium-binding domain profile. 268 303 IPR002048 GO:0005509
Sebi103g00046 373 Pfam Protein kinase domain 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi103g00046 373 FunFam calcium-dependent protein kinase 28-like 51 244 - -
Sebi103g00046 373 SUPERFAMILY EF-hand 264 335 IPR011992 -
Sebi103g00046 373 FunFam Calcium-dependent protein kinase 28 266 332 - -
Sebi103g00046 373 CDD EFh 272 330 IPR002048 GO:0005509
Sebi103g00046 373 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 320 - -
Sebi103g00046 373 Gene3D - 236 354 - -
Sebi103g00046 373 SMART efh_1 272 300 IPR002048 GO:0005509
Sebi103g00046 373 SMART efh_1 309 337 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi103g00046 Sebi-Chr103 1909720 1913207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi103g00046 1 330 EF-hand Containing Proteins AT2G17890 87.576 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi103g00046 Pkinase 2.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi103g00046 K13412 - gmx:100798941 629.402