Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi103g00018 ATGGCTGGGCAATCAGACCATGAGCTCTCATTGTTTTCAGCAGAGGAGCTTGAGTTCATTTCTGAGGATGAGATCGTAGACATTGTACCCAATCTCAAAATGGATCCTCTCTGTCTCATCTCCGGAGATTTTGGCCCATTTACGCCACAAATTGTTACTCAAGTACAACTGTGGCTGGCTATTGCTCTCAAGAGAGGCAAATGCTCCATTCGCCCTCCTCAGTGGATGTCTGTTGAAATCTCAAGACTTCTTTTTGATCATGCTCGTGACAACATTCCCGATGTATATATGGTGAGGTCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAATTGATTTGGAGGCATTTAATGGACGTACAATTGTTGTTAAGATCAAAAATTTATCTGCAATGGAAGTGAATATTGTTCGCCCATTTATTGGAAGAGCTTTACAGGCATTTTATAAGCATGATAATCCAGAGTTGATCCCGGATCCAGAGAGAGTGTCAGACAGATGGACGCAAGTTGTCAGCAATGTCCCAAGAAGGCAACTTCGAAGATAA 555 0.418 MAGQSDHELSLFSAEELEFISEDEIVDIVPNLKMDPLCLISGDFGPFTPQIVTQVQLWLAIALKRGKCSIRPPQWMSVEISRLLFDHARDNIPDVYMVRSLIEDIRDVRFHKVEIDLEAFNGRTIVVKIKNLSAMEVNIVRPFIGRALQAFYKHDNPELIPDPERVSDRWTQVVSNVPRRQLRR 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi103g00018 184 SUPERFAMILY PriA/YqbF domain 12 70 - -
Sebi103g00018 184 SUPERFAMILY GINS helical bundle-like 72 156 IPR036224 -
Sebi103g00018 184 CDD GINS_B_Psf2 13 73 - -
Sebi103g00018 184 Gene3D - 12 76 - -
Sebi103g00018 184 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 79 IPR007257 GO:0005634|GO:0006260
Sebi103g00018 184 FunFam DNA replication complex GINS protein PSF2 12 76 - -
Sebi103g00018 184 PIRSF GINS_PSF2 2 80 IPR007257 GO:0005634|GO:0006260
Sebi103g00018 184 PIRSF GINS_PSF2 78 184 IPR007257 GO:0005634|GO:0006260
Sebi103g00018 184 CDD GINS_A_psf2 65 156 - -
Sebi103g00018 184 Pfam GINS complex protein 54 91 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi103g00018 1 121 Core DNA Replication Machinery Family AT3G12530 57.143 3.83e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi103g00018 K10733 - gmx:100780528 305.449