Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi103g00017 ATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACCGATGGAGAGCTAGTTGGTTATTATCTCAGGAAGAAAGTAGCTTCTCAGAAGATTGATCTTGACGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATTGGGAATGAGGAGCAGAATGAGTGGTATTTCTTTAGCCACAAAGATAAGAAGTATCCAACTGGGACAAGAACTAACAGAGCTACGACTACAGGGTTCTGGAAAGCTACAGGAAGAGACAAGTCAGTGTATGAAAGGACAAAACTCATTGGTATGAGGAAAACTCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACGGATTGGATCATGCATGAGTATAGGCTTGAAACTGTAGAGAATGCACCTCCACAGGAGGAAGGATGGGTTGTATGCAGAGCATTCAAAAAAAGAACTAACAGCCAAACAAAGAGTATTGAAGGATGGGATCCAAGTTACTTACATGATGAACAAGCAAGTGGTGTAAGTACCTCCATGATGGACCCAATTGATCTCATCTTAAGGCAACCTCAAAGGAATATTTCACCTCAAAATTTCTTGTACAAGCAAGAGATCATAGAAACAGATAATAACATAGGCTTCATGCATCCAGAGCAATTAATACAACTTCCTCAGCTAGAAAGTCCCTCTTTGCTAAAGAGGCAACAAATTAACGATGATGATCAAAATGTAGGGTTATCCAACACAGAGAAAGTGACTGATTGGAGGGCTCTTGACAAGTTTGTGGCTTCTCAATTGAGTCAAGAACACAGGCATGAAACAGATGATGGAGTAGAGTCAAGCTTTGCAAGCCATATTCATAACAGCTCAGACATGGCATTGATGCTATTGCAGAGTAGTAGGGATGAAGGGAATAAGTTAATAAGCCCGTTTTTTAATTCAAGCTCAGACTGTGACTTTGGGATATGCGTATTTGATAAATGA 996 0.4106 MESCVPPGFRFHPTDGELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGNEEQNEWYFFSHKDKKYPTGTRTNRATTTGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQEEGWVVCRAFKKRTNSQTKSIEGWDPSYLHDEQASGVSTSMMDPIDLILRQPQRNISPQNFLYKQEIIETDNNIGFMHPEQLIQLPQLESPSLLKRQQINDDDQNVGLSNTEKVTDWRALDKFVASQLSQEHRHETDDGVESSFASHIHNSSDMALMLLQSSRDEGNKLISPFFNSSSDCDFGICVFDK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi103g00017 331 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Sebi103g00017 331 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Sebi103g00017 331 FunFam NAC domain-containing protein 14 158 - -
Sebi103g00017 331 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Sebi103g00017 331 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Sebi103g00017 331 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi103g00017 Sebi-Chr103 641396 644632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi103g00017 1 330 NAC Transcription Factor Family AT2G18060 59.673 8.17e-145 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi103g00017 NAM 7.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi103g00017 - - aprc:113869508 504.597