Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi103g00015 ATGCCTACTCTTCTTCTCCTCATGCTACTGTGCGCACCCTTCATATCATGCGCCCAGTGCAGCTCCGTCACGGAGATCCAAGCCTTAACGTCGTTCAAGCTCAACCTCCACGATCCTCTCGGCGCGCTTAACGGTTGGGACCCGTCAACGCCAGCGGCTCCATGCGACTGGCGTGGCGTTTCATGCAAAAACGACCGAGTCACGGAACTGGGCTTGCCTCGCCTTCAACTCGGTGGACGACTCAGTGACCGTATTTCCGACCTGCGCATGCTTCGGAGGCTGAGCCTGCGTTCCAACTCCTTCAACGGTACTATTCCCCCATCGCTTTCCAAATGCACGCTCCTACGCGCAGTGTTTTTGCAGGACAACTCACTCTCCGGTGAACTCCCGCTGGATATCGGAAACCTCGCCGGCCTTCAGTTTCTCAACGTCGCCGGAAACAATCTCTCCGGTATAATCCCTGGTGAACTCCCTCTCGGTTTGAAATACGTTGACCTCTCCGCGAACGCCTTCTCCGGTGAGATTCCAAGCACCATTGCTAGTCTTTCTCAGGTTCAGCTTATCAACCTATCGTACAATCAGTTCTCCGGCCAGATTCCGGCGAGCATCGGAGTGCTTCAGAACCTGCAGTACCTCTGGCTCGATCACAACTTTCTCGGAGGAACCCTACCTTCGGCCCTAGCTAATTGTACTTCTCTCGTGCATCTGAGCGCGGAAGGGAACACTCTCACCGGCGTTTTGCCGGCAGCGATTTCGGCTCTCCCGAAGCTTCAAGTGTTATCCCTTGCGCAGAACAATCTCACCGGTTCCGTTCCAGCTTCTATTTTCTGCAACGCGCAGTCGCTTCACGTTGTTCAACTAGGGTTTAACGGTTTCACTGATTTCGCAGCGCCTCAGACTGCAACGTGTTTCAGCGCTCTTGAGGTTTTGGAAATTCAGAGCAATCGCGTGCGTGGCAAGTTTCCGTTGTGGTTAACCAATGTGACCTCCTTGTCGGTGCTCGATGTTTCCGGCAATGCTCTTTCTGGTGAGATTCCACCGGAAATCGGTCATGTTTCCGGTAGAATTGGGAATTTGAGTAGATTGATGGTTCTGAATTTGAGTGGCAATGGCTTCTCTGGAGAAATTCCTGCTAGCTTGGGGAATCTTTTAAGGCTAACTACACTTGACTTGAGCAAACAGAATCTCTCTGGTGAATTACCATTTGAGCTTTCGGGGTTACCCGGTTTGCAGGTTATTGCTCTGCAAGAGAATAAGTTATCTGGGGATGTCCCTGAAGGGTTTAGCAGCTTGACAAGTTTGCAATATGTGAACCTAAGCTCTAATGAGTTTTCTGGCCATATTCCTAAAAGTTATGGCTTTCTTCCATCGTTGGTTGTTCTTTCATTATCTGATAACCACATTACAGGAATGATTCCTCCGGAAATTGGAAACTGCTCTGAAATTGAAATCCTTGAGCTTGGGTCAAATTCTTTGGCAGGTCCTATTCCCTCTGATCTGTCTGGCCTTGTCCATTTGAAAGTGCTTGATTTGAGTTGGAACAATTTATCTGGAGATATGCCTGAGGGCATCTCCAAATGCTTGTGGTTAACTGTTTTGTTAGCTGATCACAACCATCTTTCAGGTGCTATACCAGAGTCACTGGCAGAGCTATCAAACCTAACAATGCTGGACCTCTCTGCAAACAAATTGAGTGGGGGAATTCCCAGTAATCTATCTATGATCCCTGATTTGGTGTACTTCAATGTTTCGGGTAATAAACTGGAAGATAATCAGAATTTATGTGGGAACCCATTGGATAGGAAGTGCACCGAGATAGATAATAGAGACAGAAAGAGTCTATTGAGATGGCGCAAAAGGCTTAAAGCAGCTGTGTCTGGAGAAAAGAAAAAGAGTCCTAGGAGTTCTGGAACGAGTCGAGGTCGTGGCAGCATTGATAACGGTGGACCAAAACTTATCATGTTCAATACCAAAATCACACTTGCTGAAACAATGGAAGCAACTAGGAATTTCGACGAAGAGAATGTGCTGAGCAGAACAAAGTATGGATTAGTTTTCAAAGCTTGCTACAACGACGGAATGATTCTATCTATTCGCAGGCTCCCAGATGGATCACTCGATGAAAACATGTTCAGAAAAGAAGCTGAATCACTGGGGAAAATCAAGCACAGGAACCTAACCGTTCTCAGAGGCTACTACGCTGGGCCACCAGATATGAGACTCTTAGCCTACGATTACATGCCCAATGGAAACCTTGCAACGCTCCTCCAAGAAGCATCTCACCAAGATGGCCATGTTCTGAATTGGCCAATGCGACACCTCATCGCACTAGGAATTGCCCGTGGCTTAGCATTTCTGCACCAATCCTTGATGGTCCATGGTGACATGAAGCCACAGAATGTGTTGTTCGATGCAGATTTCGAAGCCCATTTATCAGATTTTGGGCTAGACCCGTTAACAGTACTAGCCAACCCAATTGAAGCCTCCACTTCAACTTCAGTTGGCACATTGGGTTACGTCTCACCAGAAGCAGTGTTAACAGGGGAAGCCACAAAGGAGTCTGACGTGTACAGCTTTGGCATTGTGATGTTGGAGCTTCTCACTGGGAAGAAACCAGTGATGTTCACAGAGGACGAGGACATAGTAAAGTGGGTAAAGAAACAGCTACAGAAAGGTCAAATAACGGAGCTACTAGAGCCTGGTTTGCTTGAGCTGGACCCAGAATCTTCTGAGTGGGAAGAGTTCTTGCTGGGTGTGAAAGTTGGGTTGCTTTGCACAGCACCAGACCCTCTTGATCGACCACCCATGTCTGACATAGTCTTCATGCTCGAAGGTTGCCGTGTTGGACCTGATATCCCATCCTCCGTGAATCCCACCACTCAACCTTCTCCAGCATAG 2898 0.4814 MPTLLLLMLLCAPFISCAQCSSVTEIQALTSFKLNLHDPLGALNGWDPSTPAAPCDWRGVSCKNDRVTELGLPRLQLGGRLSDRISDLRMLRRLSLRSNSFNGTIPPSLSKCTLLRAVFLQDNSLSGELPLDIGNLAGLQFLNVAGNNLSGIIPGELPLGLKYVDLSANAFSGEIPSTIASLSQVQLINLSYNQFSGQIPASIGVLQNLQYLWLDHNFLGGTLPSALANCTSLVHLSAEGNTLTGVLPAAISALPKLQVLSLAQNNLTGSVPASIFCNAQSLHVVQLGFNGFTDFAAPQTATCFSALEVLEIQSNRVRGKFPLWLTNVTSLSVLDVSGNALSGEIPPEIGHVSGRIGNLSRLMVLNLSGNGFSGEIPASLGNLLRLTTLDLSKQNLSGELPFELSGLPGLQVIALQENKLSGDVPEGFSSLTSLQYVNLSSNEFSGHIPKSYGFLPSLVVLSLSDNHITGMIPPEIGNCSEIEILELGSNSLAGPIPSDLSGLVHLKVLDLSWNNLSGDMPEGISKCLWLTVLLADHNHLSGAIPESLAELSNLTMLDLSANKLSGGIPSNLSMIPDLVYFNVSGNKLEDNQNLCGNPLDRKCTEIDNRDRKSLLRWRKRLKAAVSGEKKKSPRSSGTSRGRGSIDNGGPKLIMFNTKITLAETMEATRNFDEENVLSRTKYGLVFKACYNDGMILSIRRLPDGSLDENMFRKEAESLGKIKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSLMVHGDMKPQNVLFDADFEAHLSDFGLDPLTVLANPIEASTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVMLELLTGKKPVMFTEDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPPMSDIVFMLEGCRVGPDIPSSVNPTTQPSPA 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi103g00015 965 MobiDBLite consensus disorder prediction 623 649 - -
Sebi103g00015 965 Gene3D Ribonuclease Inhibitor 22 159 IPR032675 -
Sebi103g00015 965 ProSiteProfiles Protein kinase domain profile. 671 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi103g00015 965 Pfam Leucine rich repeat 456 516 IPR001611 GO:0005515
Sebi103g00015 965 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Sebi103g00015 965 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Sebi103g00015 965 Gene3D Ribonuclease Inhibitor 353 606 IPR032675 -
Sebi103g00015 965 Gene3D Ribonuclease Inhibitor 160 352 IPR032675 -
Sebi103g00015 965 Gene3D Phosphorylase Kinase; domain 1 650 746 - -
Sebi103g00015 965 FunFam Leucine-rich repeat receptor protein kinase EMS1 199 299 - -
Sebi103g00015 965 Pfam Protein kinase domain 679 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi103g00015 965 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 747 951 - -
Sebi103g00015 965 SUPERFAMILY L domain-like 81 421 - -
Sebi103g00015 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Sebi103g00015 965 Gene3D Transferase(Phosphotransferase) domain 1 747 951 - -
Sebi103g00015 965 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 349 607 - -
Sebi103g00015 965 SMART LRR_typ_2 254 278 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 136 159 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 206 230 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 328 352 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 407 430 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 551 582 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 503 527 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 359 383 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 455 479 IPR003591 -
Sebi103g00015 965 SMART LRR_typ_2 88 112 IPR003591 -
Sebi103g00015 965 SUPERFAMILY Protein kinase-like (PK-like) 653 956 IPR011009 -
Sebi103g00015 965 PRINTS Leucine-rich repeat signature 506 519 - -
Sebi103g00015 965 PRINTS Leucine-rich repeat signature 551 564 - -
Sebi103g00015 965 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 181 - -
Sebi103g00015 965 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 449 - -
Sebi103g00015 965 SUPERFAMILY L domain-like 356 599 - -
Sebi103g00015 965 FunFam Putative LRR receptor-like serine/threonine-protein kinase 634 746 - -
Sebi103g00015 965 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Sebi103g00015 965 SMART serkin_6 671 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi103g00015 Sebi-Chr103 576809 580016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi103g00015 76 965 Receptor kinase-like Gene Family AT4G36180 56.218 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Sebi103g00015 Pkinase 2.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi103g00015 - - gmx:100305362 1091.64