Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1038g00004 ATGGGTTCTCAGCAGAACGATGGCACAAGCTACCCACCATCGGAGCCCAAGCCCTGCGCCAACAACTGCGGCTTCTTCGGCACCGCCGGGAACCAGAACCTCTGTTCCAAATGCTACAGAGACTTGTCCATTCAAGAAGAGCATGCCGCTACTGCCAAAACCGCCATGGAGAAATCCCTGCTCCTCCCTGCCGCCGCCGCCATAACCGCCTCTCCGGCCGTTCTTGTAGCGGAACCTTCATCTTCCGCTGAGCCGTCTGCTGCGCCGGCAAAGGCGGCGAATCGGTGCGGCAGTTGTAACAAGAAAGTGGGGTTGACAGGGTTCGTGTGCAAGTGTGGGACCACCTTCTGTGGGACCCATCGTTATCCCGAGAAGCATGAGTGCTCGTATGACTTCAAGACTGCCGGGCGTGATGTGATTTCCAAGGCCAATCCCATAATAAAGGCCGACAAAATTCAAAGGTTCTAG 468 0.5641 MGSQQNDGTSYPPSEPKPCANNCGFFGTAGNQNLCSKCYRDLSIQEEHAATAKTAMEKSLLLPAAAAITASPAVLVAEPSSSAEPSAAPAKAANRCGSCNKKVGLTGFVCKCGTTFCGTHRYPEKHECSYDFKTAGRDVISKANPIIKADKIQRF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1038g00004 155 Gene3D - 70 151 IPR035896 -
Sebi1038g00004 155 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
Sebi1038g00004 155 Gene3D - 2 61 - -
Sebi1038g00004 155 Pfam AN1-like Zinc finger 96 132 IPR000058 GO:0008270
Sebi1038g00004 155 SUPERFAMILY AN1-like Zinc finger 81 150 IPR035896 -
Sebi1038g00004 155 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Sebi1038g00004 155 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Sebi1038g00004 155 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Sebi1038g00004 155 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Sebi1038g00004 155 FunFam Zinc finger AN1-type containing 6 71 151 - -
Sebi1038g00004 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 154 - -
Sebi1038g00004 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1038g00004 Sebi-Chr1038 56561 57028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1038g00004 13 155 C2H2 Transcription Factor Family AT3G52800 39.752 1.64e-37 124