Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1037g00005 ATGACCTTGGCTGCTCGGGATGCTGCTATTAAGAGATTTACTGATGATCCAGACTGCAAAATTTTTCTCATGAGCTTGAAGGCTGGAGGTGTTGCTCTCAATTTGACAGTAGCATCACATGTGAGTTTTCCTTATGGACCCTTGGTGGACCCTGCAGTGGAGCGTCAGGCTCAAGACAGAATTCACCGGATAGGGCAATACAAACCAATCAGAATTGTGAGATTTGTCATTGAAAACACAATAGAGGAGAGGATCTTGAAACTTCAAGAGAAGAAGGAACTGGTGTTTGAAGGGACTGTAGGCGGCTCTTCTGAGGCTCTGGGGAAATTGACGGAGGCTGACTTGAAATTTCTCTTTGTCACCTAA 366 0.4508 MTLAARDAAIKRFTDDPDCKIFLMSLKAGGVALNLTVASHVSFPYGPLVDPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1037g00005 121 Gene3D - 1 119 IPR027417 -
Sebi1037g00005 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 119 IPR027417 -
Sebi1037g00005 121 CDD SF2_C_SNF 1 76 - -
Sebi1037g00005 121 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 111 IPR001650 -
Sebi1037g00005 121 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1037g00005 Sebi-Chr1037 87695 89507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1037g00005 1 121 RAD5 or RAD16-like Gene Family AT1G05120 78.512 2.81e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1037g00005 K15083 - gmx:100786366 209.149