LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi1034g00006	ATGGATTTAAATAGTGAGGATTCTGTCGTTAACTTGGCTGATGATAGGGATGTAAGCTATAGTGACAGGGAAATAAGTGATGATAGTGGAAGAGAACGTGATATAACTACACAAGAGCAGATGGATACTGGGTTAGAAAATATGTCAGGTGAACATGTAGAACAACCAAATTCAGAGGATCATGTAGAAGAATTAATTTCAGAGGATCATGTACAAGAAAATATGCCAGAGGCAGAGGTTCACAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGCCAGATGTCATGGCTTAGCTATGAGGAAAGATGATGTAATTCGGGATGTCCAAGGCAATGTTATTATGCGTCAATATTTATGTAGAAAAGTTGGGTTGAGGGACAAAAAGCACTTTTTGAGGGTAGATCGTAAAAAAGAACACAGGCCTTTAAATCGTGTTAACTGTGAAGCAAAGTTACGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCAGCAAAATTTTTCCCTTTAATTCCTTCATATCGTGGCTTGTCTGAAGGGGGTAAAGCTCAAGTGGATGCACTACATTCTCATCGTGTTAGGCCATGTCAAATAATGGGTTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGCAGACAATGAACCAATTTTTTTCTCTAGGTTTCTATGTTCTGATGATGGTAAATTGACCCACCTATTTTGGGCTGATGGAATTAGTCGTGCTGATTATCAATTTTTTGGAGATGTGGTTGCGTTTGATGCCACATACAAGAAGAACAAATACAGGTAG	990	0.3717	MDLNSEDSVVNLADDRDVSYSDREISDDSGRERDITTQEQMDTGLENMSGEHVEQPNSEDHVEELISEDHVQENMPEAEVHRIIDLSSKDIKGLEFGSEEDAYNFYFSYARCHGLAMRKDDVIRDVQGNVIMRQYLCRKVGLRDKKHFLRVDRKKEHRPLNRVNCEAKLRVRYDYKTGKFKVVSFIECHNHELTPAKFFPLIPSYRGLSEGGKAQVDALHSHRVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVKRGKIKDGDAMAALSYLQGKADNEPIFFSRFLCSDDGKLTHLFWADGISRADYQFFGDVVAFDATYKKNKYR	329

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi1034g00006	329	MobiDBLite	consensus disorder prediction	1	53	-	-
	Sebi1034g00006	329	Pfam	FAR1 DNA-binding domain	104	194	IPR004330	-
	Sebi1034g00006	329	MobiDBLite	consensus disorder prediction	9	39	-	-
	Sebi1034g00006	329	PANTHER	OS01G0519700 PROTEIN	90	320	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi1034g00006	Sebi-Chr1034	147894	148883	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi1034g00006		FAR1	7.2e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi1034g00006	-		-	ccaj:109794460	348.206