Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1034g00005 ATGGGATCAATTATGATTGAGATTCTACCAAAAATGGTTAATCTGTTGTTTCCTTACGAGTTTTACCATGCAAGGGAGGATGTGTTAAGGAATAGGTTAGAACTCGTTGATCAGTTTGATCATCACTTTACTATTCCTCTAAAATTTGCTAGGAAGATTGTGGTAATGTGGGAAGTTGTTTCACAATTGAAGCGATATTATGATTTTGAAAAGGTAATGTATCTTCATCTTAAATATGAGGGTGGTATAAGATTCAGCTTTGAGATTAAGGATGAGGATGGTATTCCTCTTACCCCTAGCTTAGTTCATCCTACTGGGACAAGTAGTGTTTTTGAGCAGGACATAGTTAATATCAATTCTGAAAATCCAAGTAAGAATCCCAGGGGTATTGTGAATCGAACTGGTCCTCAGAATACACTTGTTGGTAGAATTGGTATGAGACGTGTGAAACAAACTCTTCCTCACAATGCTGCTGCTGGTAGGAGGGTAATGAGTTTCCAAAATCAATATGGACGTGTGACTGTTGTTGCTGGTAGGAGGGTTTTGAGTTTTGAGAAAGTAATAACAAAGAGTCAATCAAAAGGTCGACAGACGTTGCCTATTCCAAGGAAATTTGTTCAAGAATTTATTCGAAGAGACTGGAGCGAGCTGATCCTGAAGGTTCGACGTGTCCAACATTACAATTGTAAGTTGGTGAGGCGAAACGGAAGGGAAAAAGATTGCCACCTTGGCAAACCTTGGTACAAGTTAGTTTCTGACTTGAGACTCAAAAAAGGAGACAAAGTTGTTTTCGAGACAATTATTAAAGGCTTGAACACAGTCAACGTGACGATCATTCGAAAGGGGGAATAG 852 0.3897 MGSIMIEILPKMVNLLFPYEFYHAREDVLRNRLELVDQFDHHFTIPLKFARKIVVMWEVVSQLKRYYDFEKVMYLHLKYEGGIRFSFEIKDEDGIPLTPSLVHPTGTSSVFEQDIVNINSENPSKNPRGIVNRTGPQNTLVGRIGMRRVKQTLPHNAAAGRRVMSFQNQYGRVTVVAGRRVLSFEKVITKSQSKGRQTLPIPRKFVQEFIRRDWSELILKVRRVQHYNCKLVRRNGREKDCHLGKPWYKLVSDLRLKKGDKVVFETIIKGLNTVNVTIIRKGE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1034g00005 283 ProSiteProfiles B3 DNA-binding domain profile. 184 282 IPR003340 GO:0003677
Sebi1034g00005 283 CDD B3_DNA 183 280 IPR003340 GO:0003677
Sebi1034g00005 283 Gene3D - 164 283 IPR015300 -
Sebi1034g00005 283 Pfam B3 DNA binding domain 184 281 IPR003340 GO:0003677
Sebi1034g00005 283 SUPERFAMILY DNA-binding pseudobarrel domain 180 277 IPR015300 -
Sebi1034g00005 283 SMART B3_2 184 282 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1034g00005 Sebi-Chr1034 112076 113140 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi1034g00005 B3 1.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1034g00005 - K24363 lja:Lj3g3v1666020.1 95.1301