Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1033g00001 ATGGCAAAACCTATACCAAAAATTGGTTCGCGTAAAAATGGACGTATTGGTTCGCGTAAGCATCTCCGTAAAATACCAAAGGGAGTTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTGACTGTTACAGATGTACGGGGTCGGGTGATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAGGGTACACGAAGAGGGACACCATTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGAACAGTAGCAGATCAAGGCATGCAACGAGCAGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCAGCATTAAGAGCTATTCGTAGAAGTG 337 0.457 MAKPIPKIGSRKNGRIGSRKHLRKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1033g00001 112 MobiDBLite consensus disorder prediction 1 21 - -
Sebi1033g00001 112 SUPERFAMILY Translational machinery components 23 111 - -
Sebi1033g00001 112 Gene3D Ribosomal protein S11 11 112 IPR036967 GO:0003735|GO:0005840|GO:0006412
Sebi1033g00001 112 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 112 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sebi1033g00001 112 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 27 112 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sebi1033g00001 112 Hamap 30S ribosomal protein S11 [rpsK]. 11 112 IPR001971 GO:0003735|GO:0005840|GO:0006412
Sebi1033g00001 112 Pfam Ribosomal protein S11 28 112 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1033g00001 28 112 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 36.170 3.39e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1033g00001 K02948 - fve:10251554 212.231