Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1022g00008 ATGGATAGCAAGTGTGATTGGGGGAACTATACTGATACTTGTGTCATCCTTTGGGCTCTATCTATTGTGGAGGAACGAAGAATAGAAGAAGAAAAATTGAAGCAGAGGAAGATATTATATGAGATTGAAGGAACTGCAACGCCTTCCCTTGTAAACGGCAAACACAGAAGAAAAAATAAAATTGAAACAATGAACCATGGGTTGCACATGTTCAGCTTTGAAAGCATTGAATTGGCAACTGATAATTTCTCTTCATCACATAAGTTGGGTGAGGGTGGATTTGGACCTGTTTATAAGGGACAATTACTTGATGGGAGAGAAATAGCAATAAAGAGACTTTCTACAAGCTCAAGGCAAGGGTTAACAGAGTTCAAGAATGAGATATCTGATTTTGGTTTGGCAAAAATATTTGGGTTGAAAGAACCCCAACAAAACACAAATAGGGTTGTTGGAACTTATGGTTATATGGCTCCTGAGTATGCTTTAAATGGCAGAGTCTCAACCAAAATTGACGTTTTTAGTTTTGGAGTATTGATGCTTGAGATTGTGAGTGGAAAAAAGAATGCTAGTAATTATGATTCGGATTATCCCCTCAATCTCATAGGACATGCTTGGCAATTATGGAATAAGGGTACAGCTTTAGAATTAATAGACCCTATATTGAAGGGATCATGTGCTGTCAATCAAGTGTTGAGAAGCATTCATATTAGCCTTTTGTGTGTGCAAGATCAAGCTAAAGATAGACCAACTATGTCGGATGTGGTATCTTTCCTATCAAGCGAGGCTATTCTTTTAGCTGAACCGAAACAACCAGCTTTCTTCACTGATAATGGAGTGAATGGGCCTAAATGTCCTATCACTAATAACAATAATCATTCTCTAAATAGTGTAACAATTTCAACAATGAGTGGTAGATAA 918 0.3725 MDSKCDWGNYTDTCVILWALSIVEERRIEEEKLKQRKILYEIEGTATPSLVNGKHRRKNKIETMNHGLHMFSFESIELATDNFSSSHKLGEGGFGPVYKGQLLDGREIAIKRLSTSSRQGLTEFKNEISDFGLAKIFGLKEPQQNTNRVVGTYGYMAPEYALNGRVSTKIDVFSFGVLMLEIVSGKKNASNYDSDYPLNLIGHAWQLWNKGTALELIDPILKGSCAVNQVLRSIHISLLCVQDQAKDRPTMSDVVSFLSSEAILLAEPKQPAFFTDNGVNGPKCPITNNNNHSLNSVTISTMSGR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1022g00008 305 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 128 - -
Sebi1022g00008 305 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1022g00008 305 Gene3D Transferase(Phosphotransferase) domain 1 132 260 - -
Sebi1022g00008 305 Pfam Protein tyrosine and serine/threonine kinase 127 258 IPR001245 GO:0004672|GO:0006468
Sebi1022g00008 305 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 137 263 - -
Sebi1022g00008 305 SUPERFAMILY Protein kinase-like (PK-like) 67 275 IPR011009 -
Sebi1022g00008 305 Gene3D Phosphorylase Kinase; domain 1 45 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1022g00008 Sebi-Chr1022 134543 136374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1022g00008 67 305 Receptor kinase-like Gene Family AT4G23280 38.408 1.51e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1022g00008 PK_Tyr_Ser-Thr 2.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1022g00008 - - qlo:115990187 249.98