Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1022g00006 ATGGACTTTTCGGCAGAATTTGTTGCAAGCAGTGCGGGTAGAGAGTTTGTAGCTGGATGCTTTGGAGGCACTGCTGGTATCATCTCTAGTTATCCATTGGACACCCTCCGAATTATGCAACAGCAATCCAACAAAAGCTCTGCTGTCACCATCCTTAAAAATGTGTTGTCTAGGGAAGGACCAGCAGCTCTGTACCGTGGGATGGGTGTGCCATTGGCCTCTGTTACTTTTCAGAATGCTATGGTTTTTCAGAGTTATGCAATTTTCACAAGGGCATTTAGCCCGTCCATTTCTCCTGACGGCCCTCCTTCCCTCAAGTATGTTGCTTTAGGAGGGCTTGGTGCTGAAACCAAAAAGGGTCCTCTCGAGATTGCTCACAACATTTGGAAAAGGGAAGGCATTCGTGGCATTTATCGAGGACTTGGCATCACTATGCTCAGAGATGCACCTGCCCATGGCTTCTATTTCTGGACATATGAGTACACAAGGGAAAAACTTCACCCTGGCTGCAGAGAAAATTGTCAAGAAAGCATGAATACTATGTTTATAGCAGGAGGATTAGCTGGGATAGCGAGTTGGATTTTTAACTACCCTACAGATGTTATGAAGACAAGATTGCAGGCTCAAACACCTTCTTCAATGAAATACAAAGGTATTTTGGATTGTGTCCTTAAGATCATTAAAGAAGAAGGATCCTTTGGGCTATGGCGGGGTTTTGGAGCTACCCTTGTTAGAGCATTTGTCATGAACAGTGCTATATTTCCTGCTTATGAGATCTCCCTAAGGTGTCTATTTAATAATTGA 804 0.4391 MDFSAEFVASSAGREFVAGCFGGTAGIISSYPLDTLRIMQQQSNKSSAVTILKNVLSREGPAALYRGMGVPLASVTFQNAMVFQSYAIFTRAFSPSISPDGPPSLKYVALGGLGAETKKGPLEIAHNIWKREGIRGIYRGLGITMLRDAPAHGFYFWTYEYTREKLHPGCRENCQESMNTMFIAGGLAGIASWIFNYPTDVMKTRLQAQTPSSMKYKGILDCVLKIIKEEGSFGLWRGFGATLVRAFVMNSAIFPAYEISLRCLFNN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1022g00006 267 Gene3D Mitochondrial carrier domain 3 114 IPR023395 -
Sebi1022g00006 267 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 115 - -
Sebi1022g00006 267 Pfam Mitochondrial carrier protein 180 266 IPR018108 -
Sebi1022g00006 267 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Sebi1022g00006 267 Pfam Mitochondrial carrier protein 118 166 IPR018108 -
Sebi1022g00006 267 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Sebi1022g00006 267 SUPERFAMILY Mitochondrial carrier 14 258 IPR023395 -
Sebi1022g00006 267 PRINTS Mitochondrial carrier protein signature 185 207 IPR002067 GO:0055085
Sebi1022g00006 267 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Sebi1022g00006 267 PRINTS Mitochondrial carrier protein signature 22 42 IPR002067 GO:0055085
Sebi1022g00006 267 ProSiteProfiles Solute carrier (Solcar) repeat profile. 176 263 IPR018108 -
Sebi1022g00006 267 Gene3D Mitochondrial carrier domain 115 266 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1022g00006 Sebi-Chr1022 112670 114366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1022g00006 1 267 Antiporters AT1G79900 58.478 6.43e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1022g00006 K15109 - gmx:100801221 385.185