Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1022g00005 ATGGACTTCTGGGCTGATTTTGTTGTGAGCAGTGCTGGAAGAGAGTTTATAGCAGGAGGCTTTGGAGGCACAGCTGGTATAATCTCCAGTTACCCGTTGGACACCCTCCGCGTGATACAACAACAATACAGCAGAAACTCTGCCATTAGCATCCTTAGAAATGTGTTGACCAAGGAAGGACCAGTAGCTCTGTACCGTGGCATGAGTGTGCCTTTGGCCTCTGTTGTTTTTCAGAATGCTATGGTTTTCCAAAGTTATACAATTTTCACACGGGCATTTAGCTCATCTCTTTCGGTTAATGGCCCTCCTTCCCTCAAGGATGTTGCTTTAGGAGGACTTGGTGCCGGTGCTCTCCAAAGCCTATTGATCACCCCTGTTGAGTTGGTTAAAATTCGTCGTCAGTTGCAAAACAGCATAGGCCAATTGGCAGAAACCAGAAAGGGACCTCTTGACATTGCAAAGAACATTTGGAAAAATGAGGGCACTCGTGGCATTTATCGAGGACTTGGCATCACTATGCTTAGAGATGCACCTGCACATGGCTTCTACTTTTGCACATATGAATACACGAAGGAAAAGCTTCACCCTGGTTGTAGAGAAAGCAGTGAAGAAAGCATGAGTGCTATGTTTATAGCAGGAGGATTAGCCGGGATAGCGAGCTGGATTTTCAACTACCCTACAGATGTTATAAAGACAAGATTGCAGGCTCAGACACCTTCTTCAATGAAATACAAAGGTATTTGGATTGTGTCCTTAAGATCATTAAAGAAGAAGGATACATTGTGCTATGGAGGGGTTTGGGAGCTACCATTGTTAGAGCATTTGTCATGA 831 0.4452 MDFWADFVVSSAGREFIAGGFGGTAGIISSYPLDTLRVIQQQYSRNSAISILRNVLTKEGPVALYRGMSVPLASVVFQNAMVFQSYTIFTRAFSSSLSVNGPPSLKDVALGGLGAGALQSLLITPVELVKIRRQLQNSIGQLAETRKGPLDIAKNIWKNEGTRGIYRGLGITMLRDAPAHGFYFCTYEYTKEKLHPGCRESSEESMSAMFIAGGLAGIASWIFNYPTDVIKTRLQAQTPSSMKYKGIWIVSLRSLKKKDTLCYGGVWELPLLEHLS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1022g00005 276 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Sebi1022g00005 276 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 193 IPR018108 -
Sebi1022g00005 276 Gene3D Mitochondrial carrier domain 12 264 IPR023395 -
Sebi1022g00005 276 Pfam Mitochondrial carrier protein 110 194 IPR018108 -
Sebi1022g00005 276 Pfam Mitochondrial carrier protein 204 248 IPR018108 -
Sebi1022g00005 276 Pfam Mitochondrial carrier protein 11 94 IPR018108 -
Sebi1022g00005 276 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 265 - -
Sebi1022g00005 276 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Sebi1022g00005 276 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Sebi1022g00005 276 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Sebi1022g00005 276 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Sebi1022g00005 276 SUPERFAMILY Mitochondrial carrier 14 248 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1022g00005 Sebi-Chr1022 76865 80631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1022g00005 1 258 Antiporters AT1G79900 58.687 1.45e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1022g00005 K15109 - gmx:100801221 341.658