Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1022g00003 ATGTACAGGAATGCGCAGAGGAGCTTTAATGGAGGAACCGATTATTACATGGAACCCTCCACGCCACCCGGTGCTTACCGTACTTCAACGCAGAAAAAGAACGGCGAAGATTCTCCTGGTGATTTCAGCCCCGGCCTGTTGGATCTGCATTCATTTGACACTGAGCTTCTTCCTGAGATGCCAACCTCCAATGCATATGATGCCAACTCCCTGTATCAACCTATGCGGGGTAGAAGCTTTGATGACTCTGATCCTTACATGATGAACAAACAGGCTGCCAAAGCCCGTGCTCCTGAAAACATATTGAAAAGTTTTCCTGCAGAGAAAGAGAAATCAAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCAATGAATAAGAAGGAATTAGCAAAGAATGAAGAAGATATTATAGATACACATTCCAATTCTTTGACGGTACATGAAACTAAACTGAAGGTTGACCTAACTCAGTATGTGGAGAAGCATGAATTTGTTTTTGACGCTGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATCTTCGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACTTATACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTAAGATTGATGCACCATACTTACAGGAATCAGGGATTTCAATTGTTTGTGAGTTTCTTTGAAATATATGGCGGGAAGCTTTTTGATCTCCTTAACGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGATTGCAAGAGTACCGGGTATCTGATGTGGAGAATATCAAAGATTTGATTGAGAAAGGAAATGCCACAAGAAGTACAGGCACCACGGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCCCCGTCTTGTTGGCAAGCTCTCTTTCATAGATCTTGCTGGAAGTGAGCGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCCCGCACTGTTATGATATCATGCATATCACCAAGCACTGGTTCATGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTGTCAAAAGGGAACAATTCGAAGAAGGATGTTTTGTCTTCGAATTTCAACCTTAAAGAATCAACTACGGTTCCCTTATCTTCCGTTACTGCATCAGTCTATGAGGATCGCACAGCTGATGCATGGAATGATGAAAATGAAGGAGATGATTTTAGCCCACCTGAAGAGTACTACGAGCAGGTGAAGCCATCATTGAAGAAAAATGTAAAGATGGAATCATTTACTACAACAGATGACAAATTGAAGAAACCTAGTGGTCAGATCAAATGGAAGGACCTCCCAAAAGTTGAACCTAAAACCACAAATTCAGAGGATGATTTAAGTGCCCTCTTACAGGAAGAGGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACTATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCACCTGGATGATTATATATCTAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATTCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACTGGTTACTAA 1899 0.4165 MYRNAQRSFNGGTDYYMEPSTPPGAYRTSTQKKNGEDSPGDFSPGLLDLHSFDTELLPEMPTSNAYDANSLYQPMRGRSFDDSDPYMMNKQAAKARAPENILKSFPAEKEKSSSVAKIKVVVRKRPMNKKELAKNEEDIIDTHSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKDLIEKGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESTTVPLSSVTASVYEDRTADAWNDENEGDDFSPPEEYYEQVKPSLKKNVKMESFTTTDDKLKKPSGQIKWKDLPKVEPKTTNSEDDLSALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNHLDDYISRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1022g00003 632 MobiDBLite consensus disorder prediction 1 15 - -
Sebi1022g00003 632 ProSitePatterns Kinesin motor domain signature. 339 350 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sebi1022g00003 632 PRINTS Kinesin heavy chain signature 197 218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 PRINTS Kinesin heavy chain signature 340 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 PRINTS Kinesin heavy chain signature 390 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 PRINTS Kinesin heavy chain signature 306 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 Pfam Kinesin motor domain 123 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 CDD KISc_KIF2_like 117 438 - -
Sebi1022g00003 632 ProSiteProfiles Kinesin motor domain profile. 117 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 PANTHER KINESIN-RELATED PROTEIN 6 499 627 IPR027640 GO:0003777|GO:0007018
Sebi1022g00003 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 440 IPR027417 -
Sebi1022g00003 632 MobiDBLite consensus disorder prediction 23 37 - -
Sebi1022g00003 632 Gene3D Kinesin motor domain 92 443 IPR036961 -
Sebi1022g00003 632 SMART kinesin_4 115 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi1022g00003 632 MobiDBLite consensus disorder prediction 1 45 - -
Sebi1022g00003 632 FunFam Kinesin-like protein 99 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1022g00003 Sebi-Chr1022 30461 34873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1022g00003 116 440 Calmodulin-binding Proteins AT5G65930 34.328 9.08e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1022g00003 K10393 - gmx:100799100 1157.13