Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1021g00007 ATGGCAATGCTGAGGCAGGAAACTCTTCGTCTTGAATTGGGGATTCAACGGTATCTTGGAGAGGACATGAGCTGTTTACAGTATGAGGATTTGACTAAGCTTGAACAAGAATTGGAGAACTCTGTTGCTAAAGTTCGAAACCGTCAGAATGAGCTCTTGCAACAGCAAATGGAGAATCTGCGAAGGAAGGAGAGAATCTTGGAAGATGAAAACAGCAATTTGTCCAACTGGGAGCAGCGGGCAGTGTTGGAGTTTCAGAAGGCAGCAGTGGAAGCAAATAACAAAGCAATGGATCATCACTTTCCATTCTTTGAAGAGCAACCTATCCTTCAACTTGCAGCCCCTGTTCTTCCTCATCAACTTCACCACCCTTATCTTCAGCTGGCTCAGCCCAATATCCATCATGACCCTGCTCTCACCCCTGACCCTTAA 432 0.4583 MAMLRQETLRLELGIQRYLGEDMSCLQYEDLTKLEQELENSVAKVRNRQNELLQQQMENLRRKERILEDENSNLSNWEQRAVLEFQKAAVEANNKAMDHHFPFFEEQPILQLAAPVLPHQLHHPYLQLAQPNIHHDPALTPDP 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1021g00007 143 ProSiteProfiles K-box domain profile. 1 88 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi1021g00007 143 Pfam K-box region 2 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi1021g00007 143 Coils Coil 28 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1021g00007 Sebi-Chr1021 165534 166272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1021g00007 1 142 MADS-box Gene Family AT5G23260 38.788 2.53e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1021g00007 - - gmx:100783876 170.244