Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi101g00033 ATGAAAACATCAAGAACGAAGAACATTCAACACGCTGAAATTTTTCTTCGCATCACTGATGGCTTTCGCTCTGTCTCCCCAAAATCCTCGCCGCCCTCATCTGCGCTCTCATCTGCGTTCTCGGCCTCGCCGCCGTCGCCCGCTGCGATTGCCTCTGCCACCTCCGTCTCTCCTCTGGCCGCCACCAACAAAGGCGTCAAGAAGAAAGTCTTGCGCTCTCTCCCGATCGAAGCTCACCGTGACCGTGGAATCTGCAGTGAATTTCTCCGATTCCCGATCTGCCTGACTGAGTTCTTCACCGGTGACAAAATCCGAGTGCTACCTTGGTGCGACCATGGCTTCCATGTGTCATGCATCGACGCGTGGCTCAAATCGCATTCTTCGTGCCCTTCATGCCGTCAAATTCTGGTGGTTTCTAGATGCGACAAGTGTGGCAGGATCCCTGCCATTGCCACTGCCAGCTCCAGCATCGCACCGCCACCGGATTCTGAAGCCAGATTCAAGGTAAGGGAGGACGATGCCAATAAGTCTTGCCCTAGCTTCAGCTTAGGGATTTGGTTCATATTAACTTAA 573 0.534 MKTSRTKNIQHAEIFLRITDGFRSVSPKSSPPSSALSSAFSASPPSPAAIASATSVSPLAATNKGVKKKVLRSLPIEAHRDRGICSEFLRFPICLTEFFTGDKIRVLPWCDHGFHVSCIDAWLKSHSSCPSCRQILVVSRCDKCGRIPAIATASSSIAPPPDSEARFKVREDDANKSCPSFSLGIWFILT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi101g00033 190 Pfam Ring finger domain 92 133 IPR001841 -
Sebi101g00033 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 137 IPR013083 -
Sebi101g00033 190 SUPERFAMILY RING/U-box 92 139 - -
Sebi101g00033 190 ProSiteProfiles Zinc finger RING-type profile. 92 133 IPR001841 -
Sebi101g00033 190 PANTHER RING-H2 FINGER PROTEIN ATL78 51 144 IPR044602 GO:0016567|GO:0016740
Sebi101g00033 190 SMART ring_2 92 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi101g00033 Sebi-Chr101 1415131 1416687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi101g00033 58 172 C3H Transcription Factor Family AT1G76410 57.759 9.14e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi101g00033 - - gmx:100794614 164.466