Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1013g00009 ATGGCAGTCACATTCTACGACCTTAGCTCTGATTTTGGGTTGAAAAAGCTTGATGAGTACCTTCTCACCCGCAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATGTTACCGTATATGCAGCTTTGCCAAAGGTTCCATCAGATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATATCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTGGAGGGATCTTCTCTCGTGGCAGAGACTGTTGCCACCCCCCCAGCTGCTGACACAAAGGCAACTGAAGAACGGGCAGCTGCTGTGAAGGCAGCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTCAGATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTCCAAATCATGCTTACTATTGTAGATGATCTAGTTTCTGTGGACAATCTTATTGAGGAATATCTTACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATATGGATACTACTACCTTGA 639 0.4413 MAVTFYDLSSDFGLKKLDEYLLTRSYITGYQASKDDVTVYAALPKVPSDEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSSLVAETVATPPAADTKATEERAAAVKAAGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTVEPINEYVQSCDIVAFNKIWILLP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1013g00009 212 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 196 207 IPR001326 GO:0003746|GO:0005853|GO:0006414
Sebi1013g00009 212 CDD EF1B 116 207 IPR014038 GO:0003746|GO:0006414
Sebi1013g00009 212 Gene3D - 4 79 - -
Sebi1013g00009 212 Pfam EF-1 guanine nucleotide exchange domain 120 207 IPR014038 GO:0003746|GO:0006414
Sebi1013g00009 212 SUPERFAMILY eEF-1beta-like 115 207 IPR036219 -
Sebi1013g00009 212 FunFam Elongation factor 1-beta 1 like 112 207 - -
Sebi1013g00009 212 FunFam Elongation factor 1-delta 1 3 78 - -
Sebi1013g00009 212 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 99 - -
Sebi1013g00009 212 Gene3D - 111 207 IPR014717 -
Sebi1013g00009 212 SMART EF1_GNE_2 118 207 IPR014038 GO:0003746|GO:0006414
Sebi1013g00009 212 SUPERFAMILY GST C-terminal domain-like 13 67 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1013g00009 Sebi-Chr1013 107001 108749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1013g00009 5 207 Eukaryotic Initiation Factors Gene Family AT2G18110 72.807 6.58e-111 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1013g00009 K03232 - ini:109162838 314.694