Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1011g00008 ATGGGCAATCACAGGTTCAAATTATCAGATATGATGCCTAATGCTTGGTTTTACAAGCTCAGAGACATGGGTAGAGCAAGAAAGCAAACCCCAACACAACCCAGAAACAAAAAACAATCTTTACCAGCTTCAACCACACATTCATCAAAACCAAAGCAACCCCACCAATGCAATCCCAGAAAATCTTACTACTTTACAAGAGAGCTTAACCCAAGCAATAAAATCCACACTTCACCAGCAAATAACCAAAATTTCCCTGAACCACCAAGAAAATCATCCAAACAAAGACCCAAAAGAAGAACTTCAAGGACTTCTTCTTCTTCACCTAAGCTTGTAACAACCCCTTCTGTTTCTGCTAATTCTAGCTACCACAACACACTTGAATCTGATTCCCCACCTGAAAACTCCTCATCCCCACTTGATAGCTCTGCAGAATCAGAATTCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCCCACTGATGAAACTGCTTCATGTGCCTGCAAGCTACACACCAACAACACCAATGACATCATCATTGATGTAGACAACAATTCCATAGCCAGAAAAGATGATAAGCTAGAAGGGTATGAATATGATTCCTTCTCAGACCTCATGCTTCCACCAATTGTGACCAAACCAACAAAGTTCAATGACTTACTAAACGATGCAAAGAAGAAAGAAACAAAACCCAGAAGCAGAATGGCTTCACATGAAGAACAAATCATGAAAGGGTCACTAAAAGTTAAAATTGTGAAGGAAGAACAGAGGAACAACCATGTTGGTAGAAGATTCTCTGTGAGTTCACCAGGTGTGAGGCTTAGGATAAATTCACCAAGAATTGCTAGCCGGAAAGTTCAGTCACATGGCCGGAAAAGTGTGTCATCCTCCGGCGCCGGCGGCACCGGATTCAGGAGGAGTCTCTCAGATAGCTTTGCAATTGTGAAGTCTTCATTCAATCCACAGAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTGCAACATAACATAAGGACATCAAAGGATTTGGAAGATCTTCTTGCTTGCTATCTTTCTCTGAATTCAGATGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1140 0.4096 MGNHRFKLSDMMPNAWFYKLRDMGRARKQTPTQPRNKKQSLPASTTHSSKPKQPHQCNPRKSYYFTRELNPSNKIHTSPANNQNFPEPPRKSSKQRPKRRTSRTSSSSPKLVTTPSVSANSSYHNTLESDSPPENSSSPLDSSAESEFPDPEIRTDRVLPTDETASCACKLHTNNTNDIIIDVDNNSIARKDDKLEGYEYDSFSDLMLPPIVTKPTKFNDLLNDAKKKETKPRSRMASHEEQIMKGSLKVKIVKEEQRNNHVGRRFSVSSPGVRLRINSPRIASRKVQSHGRKSVSSSGAGGTGFRRSLSDSFAIVKSSFNPQRDFRESMVEMIVQHNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDNQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 104 144 - -
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 282 303 - -
Sebi1011g00008 379 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Sebi1011g00008 379 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 377 IPR038933 GO:0045892
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 71 160 - -
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 29 59 - -
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 26 59 - -
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 71 90 - -
Sebi1011g00008 379 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Sebi1011g00008 379 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Sebi1011g00008 379 MobiDBLite consensus disorder prediction 280 303 - -
Sebi1011g00008 379 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1011g00008 Sebi-Chr1011 140338 141477 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sebi1011g00008 Ovate 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1011g00008 - - aprc:113863721 484.952