Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1011g00002 ATGGAGTTGTCTGATACAATCATTGCAGCCATCTATAAGGGGAGATTCTGCACTGATCGTGGAGTTAAGGCTCCACTAGGATATGTTGAAACTGATCCTTCTGGTCGATATGGGCGTTTCAGGGATATTCTTGGCAAAGGAGCTATGAAGACTGTGTATAGGGCATTTGATGAGGTTCTGGGGATTGAAGTGGCTTGGAACCAAGTCCATCTAGGTGATGTCTTTCATTCACCAGATCAACTTCAACGCCTATATTCAGAGGTTCATCTCCTTAAGCACCTTGACCATGAATCCATGATGATCTTCTATGGTTCTTGGATTGATGTCAATTGCAGAACCTTCAACTTCATCACTGAATTGTTCACCTCAGGCACCCTTAGAGAGTATAGGCAAAAGTATAGGAGAGTAGACATGAGGGCAGTGAAAAATTGGGCTTGCCAGATTCTAAGGGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTTGTCAATGGCCATATGGGGCAGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTCGTAGCTCTCAACATGCCCATAGTGTCATAGGTACACCAGAGTTCATGGCACCAGAATTGTATGAAGAGAAATATAATGAACTGGTAGATGTTTACTCATTTGGGATGTGTATGATAGAGATCCTTACTCTTGAGTTCCCATACAGTGAATGCTCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCAGATGCATTTTACAGAATCCAAGATTTGGAAGCCCAGAGATTTGTGAAAAGATGTTTGTCAAATGTCTCAAAGAGACCATCAGCAAAGGAGCTCTTGTTGGATCCATTTTTAGCCATGGAGCAACTTGAATTGTCATTGCCAAGCACACAATTATCTACAAATCAAACTCTTGAGCTTCATTCAACTGCAGCAATTGCCAATAAGCATCTTTTAATAGGTGATCTGACAAAGAGCACAGATATGACAATAACTGGATCAATAAATGAAGATAATAACACAATTTTCCTTAAAGTGCGGATATCTGATGAAATGGGGCATACAAGACATGTATTCTTTCCATTTGACACTAAAAAAGACACTGCTTTTGAGGTAGCAATGGAGATGGTACAAGAACTTGAAATTAGCCACTTGGAACCATCAGAGATTGCTGCAATGATTGATCATGAGATATCAGCTTTAGTTCCAACTTGGAGGGATAAGTGTAAGTGCAAGCATCAACGACAGCACAGCTTCAACTATGAAGAAGATGAGGATAGCAATAATCACCATCCTTTCTTCTTCTCATCTTCTCCATCTTCCCCTCATGGTTCTCTGATTCCCAAGTCTGGTTCCTCCAGCTCCAAGAACCACTTCCATGGGAACCATTGCATAATTACTCAAGAATGGCCTCAAGATGATCACCTATTAATGAATGACGATGCAAGTTCTCTCAGCTCCATGAACTCCATCAAGTGCTCCAATATCCAATACTGCGACTCTAACAATGAAGATGAGCAAGGCCTAATAGTAGTAGATGGAGCTGAAAACAACAAAAAGTGCACAAAACCATGTCGTAAGGAAGAAGGAGAAGTTAGTAATTTCACCAAACAGTTGTGCTACATGACAATGAACTCTTGCGGTTGCAGATATGGTGGATCAAGCCATGGATGGCCAAGGCTAACGAAGGTTCGTTCGTGCATGGATGAGCGTAGAAGCCAACAACTTCTGCGCTCACAACTATTAGAGATGTATAAGTACAAGAGACGTATGTTTAACACAGTTGGGGCCACTGAGGGAATTGGGTTTCAATATCCAGATAAAAGTGGATGCTTTCCTCCTCGGAAATTCATATAG 1890 0.4148 MELSDTIIAAIYKGRFCTDRGVKAPLGYVETDPSGRYGRFRDILGKGAMKTVYRAFDEVLGIEVAWNQVHLGDVFHSPDQLQRLYSEVHLLKHLDHESMMIFYGSWIDVNCRTFNFITELFTSGTLREYRQKYRRVDMRAVKNWACQILRGLEYLHSHNPPVIHRDLKCDNIFVNGHMGQVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDVYSFGMCMIEILTLEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVKRCLSNVSKRPSAKELLLDPFLAMEQLELSLPSTQLSTNQTLELHSTAAIANKHLLIGDLTKSTDMTITGSINEDNNTIFLKVRISDEMGHTRHVFFPFDTKKDTAFEVAMEMVQELEISHLEPSEIAAMIDHEISALVPTWRDKCKCKHQRQHSFNYEEDEDSNNHHPFFFSSSPSSPHGSLIPKSGSSSSKNHFHGNHCIITQEWPQDDHLLMNDDASSLSSMNSIKCSNIQYCDSNNEDEQGLIVVDGAENNKKCTKPCRKEEGEVSNFTKQLCYMTMNSCGCRYGGSSHGWPRLTKVRSCMDERRSQQLLRSQLLEMYKYKRRMFNTVGATEGIGFQYPDKSGCFPPRKFI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1011g00002 629 FunFam probable serine/threonine-protein kinase WNK9 121 301 - -
Sebi1011g00002 629 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1011g00002 629 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Sebi1011g00002 629 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1011g00002 629 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1011g00002 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 28 527 - -
Sebi1011g00002 629 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
Sebi1011g00002 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Sebi1011g00002 629 CDD STKc_WNK 36 296 - -
Sebi1011g00002 629 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Sebi1011g00002 629 Gene3D Transferase(Phosphotransferase) domain 1 121 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1011g00002 Sebi-Chr1011 78137 82206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1011g00002 26 440 MAP Kinase Kinase Kinase AT3G51630 66.106 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi1011g00002 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1011g00002 K08867 - gmx:100272206 905.59