Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1010g00008 ATGCTTATTCTTCCAAGTGAATCCGCACCCACTTACAGTGCCCATTACTGCATGAACCAAACCTTTTACCAACCCAACACCACATTTCAATCCAACCTGAACACCCTCCTTTCTTCTCTCTCCTCCAACTCATCCCTTCAGTCCCACAACGGTTTCTACAGAACCGACGTGGGTCAAGACACCCCTGACGTTGCTGACGGCCTTTTCCTCTGCCGTGGCGACGTCAACGCCACCGTCTGCGAACCCTGCGTCGCCGCCGCAGCCACGAACATAACGCAACGATGTCGAAACGACAGAGAGGCGATAATCTGGTACGACGAGTGCATGCTGCGCTACTCGAACAAAGTCGATAATAACATGGGATTGGTTCCTGGATTTTATTTGAAGAATGAAGGAAGCATCATTAGCTCAAACGTTGAGCAGTTCAGTCAGTTATTGGCTGGACTGTTGAATGATTTGACAGCGAAAACTGCGGCGAGTTCTGTGTCAGAGAAGAAGTTTGCTGCTGGCGAAGTGGGATTCACGAGCACGCAGACTCTGTATGGAATGGCACAGTGCTTGCCTGAATGGCAAAGCTCTGATTGTGTCACGTGCTTTCGAAGCGCCATTGCAGGTCTTCCAGCTTGCTGTAATGGAAGTCAAGGAGCAAGGGTTCTGCTTCCGGCATGTAATATCAGATATGAACTCTATCCTTTTCTGTACAATACCACTTCAATGACCCCTTCTTCAGGAAGCAAAAGTTCATCAACTCTGGTTGTAGCAATTGTTGTCCCGATTGCTATTTTAGTGGCGCTTTTGGTTCTAGGCTGCTTTTGCTGGCGAAGAAGGCGAAACAAAAACCAGGCTGCAGTCCTGGAACTGAATGATAGCTTTAGGAGTTATTTAACAAATGAAGAAGAGTCTTTGCATTTTGACTTGGCTAAGATTGAAGCTGCCACAAATAGGTTCTCCAATGAGAACAAGATAGGTGAAGGTGGATTTGGTGTGGTTTATAAGGGTACTCTTCCTAGTGGACAAGAGATAGCAGTGAAAAGGCTATCAAGAAGCTCCTTGCAGGGTGACATAGAATTCAGGAATGAGGTTGCACTTGTTGCACAGCTTCAACACAGAAATTTAGTTAGACTTTTAGGATTTTGCTTGGAGGGGATGGAGAGGATACTTGTTTATGAATTCATCCCAAATTCAAGCCTTGACCACTTTCTATTTGATCATGAGAATCCAGGAGAGCTAGATTGGGCTAGGCGTTACAAAATTATAGTTGGGATTGCCCGAGGAATGCAATATCTCCATGAAGATTCAAGGCTAAGAATAATACATCGTGATCTCAAGGCTAGTAATGTTCTGTTAGATGCCAACATGAATCCAAAGATTTCAGATTTTGGTATGGCAAAGATTTTCCATGGAGATCAAAGTGATGTAAATACAAGAACAGGAAGGATAGTTGGAACTTATGGTTACATGTCTCCTGAATATGCAATGCATGGAAAATTCTCTGTGAAATCTGATGTGTTCAGCTTTGGAGTCTTAGTTTTGGAGATCATAAGTGGCAAGAAGAACACAAGTTATCATCAATCACATCATGAGGATGGCCTTCTGAGCCTTGCTTGGAAAAATTGGACGAATCAAACACCTTTCTTGATGTTGGACCCAAAACTGAGAGGTTCTTATTCTAGAAACGAAGTTAAGAGATGCATCCATATTGCTTTATTATGCGTTCAGGAAAATCCAGCTGACAGACCTTCAATGGCGACTGTAGTACTTGTGTTGAACAGTTATTCAGTAACTTTAGCATTACCTCGACAGCCAGCATCTTTTCTGCGTGGAAGAGCAACACCAGACAGATTAAGACACCAGCTTGATTCTGATCAGTCTACTAGCTCCACAATCCCATTGTCTATTAATGATTCTTTAATCACTCAAGTATATCCCCGATAA 1935 0.4357 MLILPSESAPTYSAHYCMNQTFYQPNTTFQSNLNTLLSSLSSNSSLQSHNGFYRTDVGQDTPDVADGLFLCRGDVNATVCEPCVAAAATNITQRCRNDREAIIWYDECMLRYSNKVDNNMGLVPGFYLKNEGSIISSNVEQFSQLLAGLLNDLTAKTAASSVSEKKFAAGEVGFTSTQTLYGMAQCLPEWQSSDCVTCFRSAIAGLPACCNGSQGARVLLPACNIRYELYPFLYNTTSMTPSSGSKSSSTLVVAIVVPIAILVALLVLGCFCWRRRRNKNQAAVLELNDSFRSYLTNEEESLHFDLAKIEAATNRFSNENKIGEGGFGVVYKGTLPSGQEIAVKRLSRSSLQGDIEFRNEVALVAQLQHRNLVRLLGFCLEGMERILVYEFIPNSSLDHFLFDHENPGELDWARRYKIIVGIARGMQYLHEDSRLRIIHRDLKASNVLLDANMNPKISDFGMAKIFHGDQSDVNTRTGRIVGTYGYMSPEYAMHGKFSVKSDVFSFGVLVLEIISGKKNTSYHQSHHEDGLLSLAWKNWTNQTPFLMLDPKLRGSYSRNEVKRCIHIALLCVQENPADRPSMATVVLVLNSYSVTLALPRQPASFLRGRATPDRLRHQLDSDQSTSSTIPLSINDSLITQVYPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1010g00008 644 Gene3D Transferase(Phosphotransferase) domain 1 392 597 - -
Sebi1010g00008 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 639 - -
Sebi1010g00008 644 Pfam Protein tyrosine and serine/threonine kinase 318 586 IPR001245 GO:0004672|GO:0006468
Sebi1010g00008 644 FunFam cysteine-rich receptor-like protein kinase 10 392 596 - -
Sebi1010g00008 644 FunFam Cysteine-rich receptor-like protein kinase 10 274 391 - -
Sebi1010g00008 644 ProSiteProfiles Protein kinase domain profile. 316 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00008 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Sebi1010g00008 644 CDD STKc_IRAK 322 590 - -
Sebi1010g00008 644 Gene3D Phosphorylase Kinase; domain 1 278 391 - -
Sebi1010g00008 644 ProSiteProfiles Gnk2-homologous domain profile. 11 117 IPR002902 -
Sebi1010g00008 644 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Sebi1010g00008 644 ProSiteProfiles Gnk2-homologous domain profile. 122 232 IPR002902 -
Sebi1010g00008 644 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 10 116 - -
Sebi1010g00008 644 SMART serkin_6 316 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00008 644 SUPERFAMILY Protein kinase-like (PK-like) 301 614 IPR011009 -
Sebi1010g00008 644 FunFam Cysteine-rich receptor-like protein kinase 10 126 232 - -
Sebi1010g00008 644 Pfam Salt stress response/antifungal 17 114 IPR002902 -
Sebi1010g00008 644 Pfam Salt stress response/antifungal 138 230 IPR002902 -
Sebi1010g00008 644 Gene3D - 10 116 IPR038408 -
Sebi1010g00008 644 Gene3D - 127 232 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1010g00008 Sebi-Chr1010 73708 76405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1010g00008 1 644 Receptor kinase-like Gene Family AT4G05200 49.851 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1010g00008 PK_Tyr_Ser-Thr 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1010g00008 - - ccaj:109806163 924.465