Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1010g00007 ATGTGTATCTTCAAATCCTCTGCAACTGCAACCCTCTTGCTACTTGTATCCCTATTTGGGTTACTCAACTTTGCAACTGAAGCAGCTCCAACATACAGCTCTTCTGCCTGCACAAGTGGATCCTATTACCGACCCAACACAACATTCCAAGCCAACCTGAATGTCCTCCTCTCATCCCTGGTCTCCAACTCCACCCTCCACGACGGATTCTACCGCACCAACGTATCCCTCGGAAACCCTGACGAGGTCAAGGGACTGTTCCTCTGCCGCGCCGACGTCACCCCCTCCGTTTGTCAACAGTGTGTCGCCGCCGCAGCACAGAACATTACTGGCCAATGCACCAACCAAACAGAGTCCATAATCTGGTACGACGAGTGCATGCTGCGTTACTCCAACCTTTCCTTCTTGAACAACATCGTCCCATCAACCAACTTGAATGCGGATGAGAGCGTCCCTGCCTCAGACCTTACCCGGTTCAGTGACTTTCTGGCAGCCACGTTGAATGATCTAGCACAGGAAGCTGTGAACTCTCCTTCAGGTAAGAAGTTCGCTACAAAAGAAGCGAATTTCACGAGCTCAATGAAGCTGTACACCCTGGCACAGTGCACGCCCGATTTGTCCACTTTTGACTGCAACACGTGCTTCCGAAGTGCCATCAGTGACTTTCCAACTTGCTGTGATGGGAAACGAGGTGCAAGTTCCCTACTTCCAAGTTGTAGTGTTAGATATGAACTGTACCCGTTTTACAATGTTTCTGCAATACCCACTCAACCACACCTTCCATCTCATTCTTCAGGAACAAGCAACATCTCTATAATTGTTGCGATTGTTATCCCAATTGTTGTTGCTGTCGCACTTTTCATTCTCGGTTGCTGCTACCTGCGTAAGAGGGCTAGCAACAAGTATAGCTATAATACTTACATCCGGGATTCAATTCGGGAGGATCTTACAGATGTAGAGTCCTTGCAATTTGACTTGGCTACAGTCCAAGCTGCCACGAACAGCTTCTCCGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTATCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAAGGTGCAATAGAGTTCAGGAATGAAGCTACCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGGTATTGGGATTTTGCTTGGAGGGGAGGGAGAAGATGCTTGTCTATGAGTACATACAAAACAAAAGCCTTGATCACTTTCTATTTGATCCGGTAAAGCAGAGAGAGTTAGATTGGTCAAGACGCTATAAGATAATAGTTGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTCAAAGCTAGCAATGTTTTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTTAATACAGGAAGGATAGTTGGCACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGTCAGTTCTCTGTAAAATCAGATGTGTTCAGTTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAATCAAATCAGGCTAATGACCTCTTAAGCTATGCTTGGAAAAATTGGACAGATAAAACACCTTTGGAGTTGCTGGATCCAACACTGAGAGGCTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGACAGGCCTTCAATGGCTACTATTGCACTTATGCTGAATAGTTATTCAGTTACCTTGTCATTACCTCGTCAGCCACCATCTTTCCTGCGTGGAAGAACACCTGACAAGCTAAAGCAGGGGGTTGATTCTGATCAGTCTACCTCCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATCACTGAAGTATACCCTCGATGA 1986 0.4481 MCIFKSSATATLLLLVSLFGLLNFATEAAPTYSSSACTSGSYYRPNTTFQANLNVLLSSLVSNSTLHDGFYRTNVSLGNPDEVKGLFLCRADVTPSVCQQCVAAAAQNITGQCTNQTESIIWYDECMLRYSNLSFLNNIVPSTNLNADESVPASDLTRFSDFLAATLNDLAQEAVNSPSGKKFATKEANFTSSMKLYTLAQCTPDLSTFDCNTCFRSAISDFPTCCDGKRGASSLLPSCSVRYELYPFYNVSAIPTQPHLPSHSSGTSNISIIVAIVIPIVVAVALFILGCCYLRKRASNKYSYNTYIRDSIREDLTDVESLQFDLATVQAATNSFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGAIEFRNEATLVAKLQHRNLVRVLGFCLEGREKMLVYEYIQNKSLDHFLFDPVKQRELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNQANDLLSYAWKNWTDKTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPPSFLRGRTPDKLKQGVDSDQSTSCSIPWSVNEVSITEVYPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1010g00007 661 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Sebi1010g00007 661 SUPERFAMILY Protein kinase-like (PK-like) 322 628 IPR011009 -
Sebi1010g00007 661 MobiDBLite consensus disorder prediction 623 644 - -
Sebi1010g00007 661 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00007 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 658 - -
Sebi1010g00007 661 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00007 661 FunFam Cysteine-rich receptor-like protein kinase 10 296 411 - -
Sebi1010g00007 661 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Sebi1010g00007 661 Pfam Protein tyrosine and serine/threonine kinase 339 604 IPR001245 GO:0004672|GO:0006468
Sebi1010g00007 661 Gene3D Phosphorylase Kinase; domain 1 297 411 - -
Sebi1010g00007 661 Pfam Salt stress response/antifungal 37 132 IPR002902 -
Sebi1010g00007 661 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Sebi1010g00007 661 Gene3D - 142 248 IPR038408 -
Sebi1010g00007 661 Gene3D - 30 135 IPR038408 -
Sebi1010g00007 661 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Sebi1010g00007 661 FunFam Cysteine-rich receptor-like protein kinase 10 142 248 - -
Sebi1010g00007 661 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Sebi1010g00007 661 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Sebi1010g00007 661 CDD STKc_IRAK 342 608 - -
Sebi1010g00007 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Sebi1010g00007 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1010g00007 Sebi-Chr1010 69157 71905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1010g00007 4 661 Receptor kinase-like Gene Family AT4G05200 50.147 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1010g00007 PK_Tyr_Ser-Thr 4.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1010g00007 - - gmx:113000776 1023.85