Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1010g00005 ATGGCTTCGAAATCCTTCAAGCTTTTCTTTCTGTTTGTCCTTATTAACACCCTCAGTTGTGTAACTACTAGAGCCCAAGGCCCTGTTTTTCTTTACCAGTTTTGCTATAGCAACGGAACCACCACTAATAGCACTTTTCAATTGGACCTAAGGACTCTTTTCTCTTCGTTATCTTCCAATGCCTCGGCCAACAATGAATTCTACAACACCACAGTCACCGGCAGAAACCCCTCCGACACAGCATATGGACTATTCATGTGCAGGGGTGACGTGTCCTCATGTGGACAGTGCGTGGAAAACTCAACTCAAAAACTATCATCAGACCAAGAGTGCTCCTTGTCCAAAGAGGCTGTGATTTGGTACGACGAGTGCATGGTTCGGTATTCCAACCGCTCTTTTTTCACCACCGTTGACACGAGGCCTGCTGTTTACTTGTTGAACTCAGCCAATACCTCGAACCAGGAAAGCTTCATGCGCTTGTTGTTCACCACCATGAACCAAACAGCTGATGAAGCAGCCAATTCTCCCACTGTCAAAAAGTACGCCACAAAGGAAGCAAACATTTCTGGATTTCAGACACTTTATTGCCTGGCTCAGTGCACAGAGGACTTGTCAAATTCAGATTGCAGAACTTGTCTTAGTGATGCCATAGGGGAACTTCCACAGTGCTGTGGAGGGAAGCAGGGAGGGAGAGTTCTATATCCAAGCTGTAATGTTAGGTATGAATTGTACCCTTTCTATAGCTCCCCTGCTCCCCCACCAACTCCTTCACCACCAGGGCTTGTTCCTCCAACCAATTCTTCTAATTCCGGAGGAAGTAGTGGGATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCAATTACAGTGGCTGTGCTGCTATTTATAGTGGGAATTTGTTTCTTAAGTAAAAGAGCAAAGAAGGAGCGTGACTCTGCACAAGACCAAAAATCTGCAACTGAGATCACCACCGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGTAGCCACAAACAAATTCTCTGGAGCTAATAAGCTAGGTGAAGGTGGTTTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTCAAGAGACTCTCTAAAAGCTCTGGACAAGGTGGGGAAGAATTTAAGAATGAAGTTGAGCTGGTTGCCAAGCTTCAACATAGAAATTTAGTGAGGCTTCTTGGATTTTGCTTGGAAAGAGAAGAAAAGATGCTTGTCTACGAATTTGTAGCCAACAAAAGTCTTGACTATATCCTTTTTGATCCTGAAAAGCAAAGGGGGCTAGATTGGACAAGGCGTTACAAGATTATTGGAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATTATTCACCGTGATCTCAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGGAAATACCAGCAGAATAGTAGGGACATAG 1524 0.4364 MASKSFKLFFLFVLINTLSCVTTRAQGPVFLYQFCYSNGTTTNSTFQLDLRTLFSSLSSNASANNEFYNTTVTGRNPSDTAYGLFMCRGDVSSCGQCVENSTQKLSSDQECSLSKEAVIWYDECMVRYSNRSFFTTVDTRPAVYLLNSANTSNQESFMRLLFTTMNQTADEAANSPTVKKYATKEANISGFQTLYCLAQCTEDLSNSDCRTCLSDAIGELPQCCGGKQGGRVLYPSCNVRYELYPFYSSPAPPPTPSPPGLVPPTNSSNSGGSSGISSGTIVAIVVPITVAVLLFIVGICFLSKRAKKERDSAQDQKSATEITTVESLRFDFSTIEVATNKFSGANKLGEGGFGEVYKGLLPSGQEVAVKRLSKSSGQGGEEFKNEVELVAKLQHRNLVRLLGFCLEREEKMLVYEFVANKSLDYILFDPEKQRGLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTSRIVGT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1010g00005 507 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 69 507 - -
Sebi1010g00005 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Sebi1010g00005 507 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Sebi1010g00005 507 SMART serkin_6 342 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00005 507 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Sebi1010g00005 507 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Sebi1010g00005 507 FunFam Cysteine-rich receptor-like protein kinase 10 304 417 - -
Sebi1010g00005 507 FunFam Cysteine-rich receptor-like protein kinase 25 141 246 - -
Sebi1010g00005 507 Gene3D Transferase(Phosphotransferase) domain 1 418 507 - -
Sebi1010g00005 507 Pfam Salt stress response/antifungal 150 244 IPR002902 -
Sebi1010g00005 507 Pfam Salt stress response/antifungal 39 130 IPR002902 -
Sebi1010g00005 507 Gene3D Phosphorylase Kinase; domain 1 302 417 - -
Sebi1010g00005 507 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 132 - -
Sebi1010g00005 507 Gene3D - 140 246 IPR038408 -
Sebi1010g00005 507 Gene3D - 28 133 IPR038408 -
Sebi1010g00005 507 ProSiteProfiles Protein kinase domain profile. 342 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00005 507 MobiDBLite consensus disorder prediction 252 272 - -
Sebi1010g00005 507 FunFam Os07g0541700 protein 418 507 - -
Sebi1010g00005 507 Pfam Protein kinase domain 345 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi1010g00005 507 SUPERFAMILY Protein kinase-like (PK-like) 322 507 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1010g00005 Sebi-Chr1010 61641 64032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1010g00005 5 507 Receptor kinase-like Gene Family AT4G05200 53.876 2.90e-173 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi1010g00005 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1010g00005 - - gmx:100787420 746.888