Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi1010g00004 | ATGCTTCCCATAACTCTTCTGCTTCTCTGCTTCCCAATAGAACTCTTGATTAGCAGAACCCAGGCAGAGCCTACTTACAGTTATCACTTCTGTCTAAACACAACCACTTTTGCCCCAAACAGCATCTACCAAACCAATCTCAAAACTTTACTCTCTACTCTTTCTTCAAACTCCAATCAAAGTGATGGGTTCTACAACACCACCACTGGTCAAAACAACCCAAACAACACGCTCTATGGTCTCTTCCTCTGTCGGGGAGACGTCACCACTCAGACATGCCAGGACTGTGTCTCAACAGCAACCAAACAAGTCCTTCAGAGATGTCCCAACGAGAAAGAGGCTTTCATTTGGTACGATGAATGCTTGCTACAGTATTCTGATGAGTCTTTCTTTTCCACGGTGCAAGAAAGACCACTAATTCCCTTGTCCAACAGTGCCAATGCCTCGGACCAGAGTAGCTTCATGCAGTTGGTGGGTGTTACCTTGCGTGCAGTAGCTGATGAAGCAGAAAACGGTGAGAATGGCAAGAAGTTTGCCACCAAAGAAGCCAATTTCACTGGTTCTACAATTTTGTACACACTTGGACAGTGCACTCCAGATTTGTCAACACCAGATTGCAATAAGTGTCTGCAGATAGCGATTGCAAACCTACCCAATTGCTGCAATGGGAAACTGGGTGGAAGAGTGCTCACTCCTAGTTGTTATGTTAGGTATGAAGTGTACCCTTTCTACCGAAGCGTGGCTTTGGCACCAGTGCCTAGGCCAGACTTACCTCAGGAAGGAAGAAGCAAGACCTCCACTGGGACAATCATTGCCATAATTGTCACTACTGTTTTATTTATAGTGGTTGTCTTTCTCTGCTGCTGGTACCTAACAAGAGGAGCAAGGAAGAAGTATACTTCTTTTCCGGAACAAAATGTTGAAATTTCAACTGCAGAATCGCTGCAATTTGATTTAGATACAATAAAATCTGCCACAGACAACTTTTCCCGTGTCAATAAATTAGGTCAAGGAGGATTTGGGGAGGTATACAAGGGCACACTTCCTAGTGGACTTGATATAGCTGTGAAGAGGCTATCACGCAGCTCTAGACAAGGTGTTGAACAGTTCAAGAATGAGGTTGTTACAATGGCACAGCTTCAACATAGAAACCTTGTAAGGCTGCTGGGATTTTGCTTGGATGAAGAAGAAAAAATACTCATCTATGAATATGTTCCCAACAAAAGCTTGAACCATTTTCTGTTTGATCCTCAATTAGGAAATACACTGGATTGGTCAAAACGTTACATGATAATTGGTGGAATTGCACGAGGAATCCTATATCTTCATGAAGATTCACGGCTCAGAATTATACACCGTGATCTTAAAGCTAGTAATATATTGCTGGATGAAGAATTAAATCCTAAAATTTCGGATTTTGGTACAGCCAAGATTTTTGGAGGTGACCTAACTCAAGCAAACACAAATAGAATTGTTGGAACCTTTGGCTACATGTCTCCGGAATACGCAATGCATGGGCAATTTTCAGTTAAATCTGATGTGTACAGTTTTGGTGTTATGGTTCTAGAAATTATCAGTGGCAGGAAGAATAAATCTGACCTGTTGAGCTATGCCTGGAAGCTGTGGAGGGAAGGGGCGCAATTGGAATTGTTGGATCCTGCTCTAAAGGATTCTTATTCAAGAGAGGAAGTTATCAGGACCCTTCTGTCTTCCTTATCGTCCAACGTCACCGGAAACACTGCATTCTACAACACCACCGTATCCGGCGGAAGCTCCTCCGACACCGTCTATGGCCTCTTCATGTGCAGGGGTGACGTGCCCCGTGAACTATGTCAAAAATGCGTGGCAAACGCAACCCAAAGACTACATGGTCAAGGTTCAGATACGTGCCCCTTTGCGAAAGGTGCTATAATTTGGTATGATGAGTGCATGGTTCGCTATTCCAATAGGTACTTCTTCTCCACTGTGGACACAAGGCCTAGAATGCGCCTTCGGAACACTGCCAATGTCTCTGACCCAGAAAGCTTCGTACGTTTGTTGTACACTACTTTGAACGAAAGTGCAGATGAGGCAGCAAATTCTTCTAATGGTGCCAGATTTGCAACAAAGGAAGCTAAGATATCTGGGTTCCAAACTCTGTATTGTTTAACTCAGTGTACACCGGATTTGTCGCCCCAAGATTGTAGAAGGTGTCTCAGTGGTGTGATTGGGGACCTTGCATGGTGTTGTCATGGAAATCAAGGAGGAAGAGTTCTGTATCCCAGTTGTAACTTTAGGTATGAATTGTACCCTTTCTATAGAATGGCATCCCCAACACCTGAAGGACTTGTTAGTCCTACAAATTCTGCAATACAAAAAGGAAAAAAAGGCATCTTATCAGAGACAGCCACTGCAACTTTTATTTCAGTTACTGTTGCTGTGCTATCATGGGCATTTGTTTCTTAA | 2445 | 0.4339 | MLPITLLLLCFPIELLISRTQAEPTYSYHFCLNTTTFAPNSIYQTNLKTLLSTLSSNSNQSDGFYNTTTGQNNPNNTLYGLFLCRGDVTTQTCQDCVSTATKQVLQRCPNEKEAFIWYDECLLQYSDESFFSTVQERPLIPLSNSANASDQSSFMQLVGVTLRAVADEAENGENGKKFATKEANFTGSTILYTLGQCTPDLSTPDCNKCLQIAIANLPNCCNGKLGGRVLTPSCYVRYEVYPFYRSVALAPVPRPDLPQEGRSKTSTGTIIAIIVTTVLFIVVVFLCCWYLTRGARKKYTSFPEQNVEISTAESLQFDLDTIKSATDNFSRVNKLGQGGFGEVYKGTLPSGLDIAVKRLSRSSRQGVEQFKNEVVTMAQLQHRNLVRLLGFCLDEEEKILIYEYVPNKSLNHFLFDPQLGNTLDWSKRYMIIGGIARGILYLHEDSRLRIIHRDLKASNILLDEELNPKISDFGTAKIFGGDLTQANTNRIVGTFGYMSPEYAMHGQFSVKSDVYSFGVMVLEIISGRKNKSDLLSYAWKLWREGAQLELLDPALKDSYSREEVIRTLLSSLSSNVTGNTAFYNTTVSGGSSSDTVYGLFMCRGDVPRELCQKCVANATQRLHGQGSDTCPFAKGAIIWYDECMVRYSNRYFFSTVDTRPRMRLRNTANVSDPESFVRLLYTTLNESADEAANSSNGARFATKEAKISGFQTLYCLTQCTPDLSPQDCRRCLSGVIGDLAWCCHGNQGGRVLYPSCNFRYELYPFYRMASPTPEGLVSPTNSAIQKGKKGILSETATATFISVTVAVLSWAFVS | 814 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi1010g00004 | 814 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 138 | 243 | - | - | |
Sebi1010g00004 | 814 | SUPERFAMILY | Protein kinase-like (PK-like) | 308 | 574 | IPR011009 | - | |
Sebi1010g00004 | 814 | ProSiteProfiles | Protein kinase domain profile. | 329 | 583 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sebi1010g00004 | 814 | ProSiteProfiles | Gnk2-homologous domain profile. | 136 | 243 | IPR002902 | - | |
Sebi1010g00004 | 814 | ProSitePatterns | Protein kinases ATP-binding region signature. | 335 | 357 | IPR017441 | GO:0005524 | |
Sebi1010g00004 | 814 | FunFam | Lectin-domain containing receptor kinase A4.3 | 405 | 580 | - | - | |
Sebi1010g00004 | 814 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 293 | 404 | - | - | |
Sebi1010g00004 | 814 | Gene3D | Transferase(Phosphotransferase) domain 1 | 406 | 558 | - | - | |
Sebi1010g00004 | 814 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 532 | IPR001245 | GO:0004672|GO:0006468 | |
Sebi1010g00004 | 814 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 660 | 765 | - | - | |
Sebi1010g00004 | 814 | Pfam | Salt stress response/antifungal | 31 | 127 | IPR002902 | - | |
Sebi1010g00004 | 814 | Pfam | Salt stress response/antifungal | 670 | 763 | IPR002902 | - | |
Sebi1010g00004 | 814 | Pfam | Salt stress response/antifungal | 563 | 649 | IPR002902 | - | |
Sebi1010g00004 | 814 | Pfam | Salt stress response/antifungal | 146 | 240 | IPR002902 | - | |
Sebi1010g00004 | 814 | SMART | serkin_6 | 329 | 633 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sebi1010g00004 | 814 | PANTHER | CYSTEINE-RICH REPEAT SECRETORY PROTEIN | 10 | 253 | - | - | |
Sebi1010g00004 | 814 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 450 | 462 | IPR008271 | GO:0004672|GO:0006468 | |
Sebi1010g00004 | 814 | Gene3D | - | 660 | 765 | IPR038408 | - | |
Sebi1010g00004 | 814 | Gene3D | - | 139 | 243 | IPR038408 | - | |
Sebi1010g00004 | 814 | Gene3D | - | 23 | 130 | IPR038408 | - | |
Sebi1010g00004 | 814 | Gene3D | - | 559 | 652 | IPR038408 | - | |
Sebi1010g00004 | 814 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 24 | 130 | - | - | |
Sebi1010g00004 | 814 | ProSiteProfiles | Gnk2-homologous domain profile. | 25 | 130 | IPR002902 | - | |
Sebi1010g00004 | 814 | Gene3D | Phosphorylase Kinase; domain 1 | 291 | 404 | - | - | |
Sebi1010g00004 | 814 | CDD | STKc_IRAK | 335 | 569 | - | - | |
Sebi1010g00004 | 814 | ProSiteProfiles | Gnk2-homologous domain profile. | 543 | 652 | IPR002902 | - | |
Sebi1010g00004 | 814 | ProSiteProfiles | Gnk2-homologous domain profile. | 658 | 765 | IPR002902 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi1010g00004 | Sebi-Chr1010 | 55087 | 60530 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi1010g00004 | 565 | 808 | Receptor kinase-like Gene Family | AT4G05200 | 43.137 | 9.70e-49 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Sebi1010g00004 | PK_Tyr_Ser-Thr | 9.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi1010g00004 | - | - | vvi:100257888 | 661.759 |