Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1009g00004 ATGAACCATCCAACCAAGGAAGACCAAGTTGAATCATTTCTAATTTCTGATTGGACCGGTAAGATGGTGCTCTTTAATACCCAACTTGTAGCTGCACGTTCCTCATCCAGCACCGGTAAGGGGAAGAACCATGAAGGGTCAGTGAAGTATGGTTTCACTCTAGTGAAAGGGAGAGCTAATCATCCAATGGAGGATTACCATGTTGCCAAGTTTATGAAGATAAAGGAAAAGGAATTGGGATTGTTTGCTATTTATGATGGTCACCTGGGAGATCGTGTACCTGCCTACTTACAGAAACATTTGTTTTCCAACATTTTAAAGGAGGAAGAATTCTGGGATGACCCTGCTGCATCTATAGCAAAAGCATATCTGAGTACAGATCAGGCAATTCTTTCACTTAGTTCTGATTTGGGACGTGGTGGATCAACAGCTGTAACTGCAATATTAATCAATGGTCAAAAGTTATTGATAGCTAATGTAGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCGGTGCAAGTGACTACAGATCACGAGCCCAACACAGAAAGAGGCAGCATTGAGAATAAAGGTGGTTTTGTCTCCAACATGCCAGGTGATGTGCCTAGAGTAAATGGGCAACTGGCCGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGATCAGACCCTGATGTACAGAGTATTGATGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGCCTAATCAAGAGGCCGTGGATATTGCTAGAAGGATGAAAGATCCACTGAAAGCAGCTAAGCAGCTAACAGCTGAAGCCTTAAAAAGAGACAGTAAAGATGATATATCTTGCGTTGTGGGCATGCCAATTTATGGACTGCAACAAAACATCATATACTACATACTTGGTTGGGTTAGTTACTTCTGA 948 0.4177 MNHPTKEDQVESFLISDWTGKMVLFNTQLVAARSSSSTGKGKNHEGSVKYGFTLVKGRANHPMEDYHVAKFMKIKEKELGLFAIYDGHLGDRVPAYLQKHLFSNILKEEEFWDDPAASIAKAYLSTDQAILSLSSDLGRGGSTAVTAILINGQKLLIANVGDSRAVLSRKGQAVQVTTDHEPNTERGSIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQSIDVDVDIDILILASDGLWKVMPNQEAVDIARRMKDPLKAAKQLTAEALKRDSKDDISCVVGMPIYGLQQNIIYYILGWVSYF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1009g00004 315 ProSiteProfiles PPM-type phosphatase domain profile. 49 296 IPR001932 -
Sebi1009g00004 315 FunFam Probable protein phosphatase 2C 39 40 295 - -
Sebi1009g00004 315 SMART PP2C_SIG_2 60 296 IPR001932 -
Sebi1009g00004 315 CDD PP2Cc 48 293 IPR001932 -
Sebi1009g00004 315 SUPERFAMILY PP2C-like 47 293 IPR036457 -
Sebi1009g00004 315 Pfam Protein phosphatase 2C 58 289 IPR001932 -
Sebi1009g00004 315 Gene3D - 44 296 IPR036457 -
Sebi1009g00004 315 PANTHER PROTEIN PHOSPHATASE 42 293 IPR015655 GO:0004722|GO:0006470
Sebi1009g00004 315 SMART PP2C_4 45 294 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1009g00004 Sebi-Chr1009 59878 62773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1009g00004 20 293 PP2C-type Phosphatase Gene Family AT1G22280 71.277 3.28e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1009g00004 K17506 - gmx:100797292 440.269