Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1007g00003 GAGAGGAATAAAGCCGTTCGTTGGACAAAAGAGGAGCATGGACGCTTTCTGGTGGGACTTGAGAACTATGGCAGAGGACATTGGAAAAATATAGCTCGCTATTCTGTAAGAACAAAAACTCCTACCCAAGTGGCAAGCCATGCTCAAAAGTACTTCCTAAGGCAAAAGCTTTCTGGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGATATCACCACTGACAATCTTACAGAACCTACAACTAATTCAGGTCAAGACAAGCCTCTTTTGTTCAATGAGTCTCTCATGCCAATTATGCAAGCAGAAGGGATTAATCACCTCATTGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCACAATGTGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGATGAAATGTTCATGTTTCCCTCATCTGATATCTATTCCGAGACCCTCAAGTTTCAAGGTCAGCAGGATCTAGACAAATGTCTTTTTCATCATGCTTATGCCCAGCAAAATGCTCAAGGTTTCGGAACCACTTCTAATGACTTCAATAAGGACGCTGTTTTTGGGTTTTGGTGA 621 0.4155 ERNKAVRWTKEEHGRFLVGLENYGRGHWKNIARYSVRTKTPTQVASHAQKYFLRQKLSGGKDNKRRSSIHDITTDNLTEPTTNSGQDKPLLFNESLMPIMQAEGINHLIEEPLMEVFNPNYESLMTNVQPEGINHHNVEPLMEVFNPNYDEMFMFPSSDIYSETLKFQGQQDLDKCLFHHAYAQQNAQGFGTTSNDFNKDAVFGFW 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1007g00003 206 Pfam Myb-like DNA-binding domain 7 52 IPR001005 -
Sebi1007g00003 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Sebi1007g00003 206 CDD SANT 7 52 IPR001005 -
Sebi1007g00003 206 MobiDBLite consensus disorder prediction 57 72 - -
Sebi1007g00003 206 NCBIfam myb-like DNA-binding domain, SHAQKYF class 3 55 IPR006447 GO:0003677
Sebi1007g00003 206 MobiDBLite consensus disorder prediction 73 88 - -
Sebi1007g00003 206 Gene3D - 6 57 - -
Sebi1007g00003 206 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 156 IPR043363 -
Sebi1007g00003 206 ProSiteProfiles SANT domain profile. 1 56 IPR017884 -
Sebi1007g00003 206 SMART sant 4 54 IPR001005 -
Sebi1007g00003 206 SUPERFAMILY Homeodomain-like 2 56 IPR009057 -
Sebi1007g00003 206 ProSiteProfiles Myb-like domain profile. 1 52 IPR001005 -
Sebi1007g00003 206 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1007g00003 Sebi-Chr1007 13229 14032 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi1007g00003 Myb_DNA-binding 2.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1007g00003 - - gmx:100783469 191.43