Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi1003g00002 ATGAAGCCTTGGTGTAACTGCGACATTTGCCGGAACTACTTGTCCATGAGTTGGGCCAGCGAGTTTGGGAACCTCTGCGATTGGTACACTTACCTTCTTCGCAAATCACCCACGGGGACCATCCACGTGCACGTGCTGGGCAACACCATCACGTGCAACGCGCAGAACGTGGAGTACATGCTCAAAACCCACTTCGACAACTACCCCAAAGGGAAGCCATTCTCCACCATCCTCGGCGACCTTCTCGGCCGCGGAATCTTCAACGTCGACGGCGACTCCTGGAACTTCCAGCGCAAAATGGCTAGCCTGGAACTCGGAAGCGTGGCGATTCGTTCCCACGCGCTTGAGATAGTCACCGAGGAGATCCACACGAGGCTCATTCCTTTCATCGCTTCAGCCGCACGTGGCGAGCGTAACAGAATCGTTGACTTGCAAGACATATTGCGACGGTTCTCCTTCGATAACATCTGCAAATTCTCCTTCGGGTTGGACCCATGCTGCCTCCAACCGTTGCTACCGGTTTCGGACTTAGCCGTCGCGTTCGACACGGCGTCGAAGCTCTCGGCGGAGCGTGCACTGACGGCGTCGCCGGCGGTATGGAAGATCAAGCGGCTCTTCAATGTGGGATCGGAGAAGAAGCTGAAGGAAGCGATCAACGTAGTGAACAAGTTAGCAGAAGAGATGATAAACAAGCGTAAGGAAATTGGTTTCACCGCACGGAAGGACCTTCTTTCTCGGTTCATGAGTTTGATCAACGACGACAAATACCTGAGGGACATCGTGGTGAGTTTCCTTTTGGCGGGTCGTGACACGGTGGCAGCGGCGTTGACCGGTTTCTTTTGGTTATTGTCAAAGAACCCGCAGGTGGAGAAGCTGATCAGGGATGAGCTGGACCGTGTGATGAAACCGGTTCAGGAACTAGCGAGTTTTGAACAAATCCGTGAAATGCATTACCTCAACGCTGCGGTTTACGAGAGCATGAGGCTTTTCCCTCCGGTTCAGTTTGACTCCAAGTTCGCTAAAGAGGATGACGTGTTACCGGATGGGACGTTTGTACGGAAGGGCACCAGGGTTACATACCACCCGTATGCGATGGGTCGGATGGAGCGGATTTGGGGCCCCGATTGTCTTGAATTCAAGCCTGAGAGGTGGTTGCGGGACGGTGTGTTTGTACCAGAGAGTCCTTTCAAGTACCCGGTTTTTCAGGCAGGTGCTAGGGTCTGTTTGGGGAAGGAGTTGGCTTTGGTGGAAATAAAGTCTGTTGTAGCTGCCTTGGTAAGGCGGTTTGATATCCGGGTCGTGAGAGAAATTACGGAGCCCCGATTTGTCCCGGGACTTACCGCCACAGTACAGGGTGGCTTGCCAATTCAAGTTTATGAAAGACAACACTGA 1392 0.5323 MKPWCNCDICRNYLSMSWASEFGNLCDWYTYLLRKSPTGTIHVHVLGNTITCNAQNVEYMLKTHFDNYPKGKPFSTILGDLLGRGIFNVDGDSWNFQRKMASLELGSVAIRSHALEIVTEEIHTRLIPFIASAARGERNRIVDLQDILRRFSFDNICKFSFGLDPCCLQPLLPVSDLAVAFDTASKLSAERALTASPAVWKIKRLFNVGSEKKLKEAINVVNKLAEEMINKRKEIGFTARKDLLSRFMSLINDDKYLRDIVVSFLLAGRDTVAAALTGFFWLLSKNPQVEKLIRDELDRVMKPVQELASFEQIREMHYLNAAVYESMRLFPPVQFDSKFAKEDDVLPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLRDGVFVPESPFKYPVFQAGARVCLGKELALVEIKSVVAALVRRFDIRVVREITEPRFVPGLTATVQGGLPIQVYERQH 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi1003g00002 463 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PANTHER CYTOCHROME P450 14 454 - -
Sebi1003g00002 463 Coils Coil 214 234 - -
Sebi1003g00002 463 Gene3D Cytochrome P450 12 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 Pfam Cytochrome P450 49 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 SUPERFAMILY Cytochrome P450 13 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi1003g00002 463 CDD CYP86A 43 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi1003g00002 Sebi-Chr1003 112397 113788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi1003g00002 4 462 Cytochrome P450 AT2G27690 63.734 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi1003g00002 K20624 - gmx:100813091 753.051