Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ropsun76g00002 ATGGTCTTTTCCATACAAGTCCTGCAGAATGCCACTGACAATTTCAATGAGAAAATTATACTGGGAAAAGGAGGTTCCGAGATAGTTTATAAATGTGAACTCCATGATAGTACCAAAATTACAGTTAAAAGAATGAAATCTGGGACAATAACTGGGAGAGGTGCAACAGAATTTGAGACTGAAATTGTTGTCTTAATGAAGGTTCATCACCGACATCTTGTTGTTCTTCTTGGTTACTACATAGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAAGGGACACTTAGTAGGCATCTTTTTAAATGGCAAGAGGAAGAATTTGGAACCACCGGAGTGGACTAG 351 0.3875 MVFSIQVLQNATDNFNEKIILGKGGSEIVYKCELHDSTKITVKRMKSGTITGRGATEFETEIVVLMKVHHRHLVVLLGYYIDGNEKLLVYEYMPQGTLSRHLFKWQEEEFGTTGVD* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ropsun76g00002 116 Pfam Protein tyrosine and serine/threonine kinase 20 108 IPR001245 GO:0004672|GO:0006468
Ropsun76g00002 116 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Ropsun76g00002 116 PANTHER OSJNBA0070M12.3 PROTEIN 1 109 - -
Ropsun76g00002 116 ProSiteProfiles Protein kinase domain profile. 15 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ropsun76g00002 116 FunFam receptor-like protein kinase FERONIA 1 92 - -
Ropsun76g00002 116 SUPERFAMILY Protein kinase-like (PK-like) 5 106 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ropsun76g00002 10 103 Receptor kinase-like Gene Family AT2G23200 51.064 5.97e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ropsun76g00002 PK_Tyr_Ser-Thr 2.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ropsun76g00002 K00924 - gmx:100813768 166.392