Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ropsun57g00001 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTACTGAAGAAAAGATGAATGTGGAAACAAATCCTGTTGAGAGAGGTGGCAAAGATCAAGAGCAGCATGTAGATGCATCCAAAGAAACTACTGCTGTCACACTTAATTCCAATGTTTCTACACTGGCTAGAACTGAGAAGTCAGGTTATGATCAGCTTCCAAAAGAATTACATGAAATGAAAATTAGAGATGATAAAGCGAAAAACAACAATGAAAAGGATATGGAGACAACTATTGTGAATGGTAATGGAACAGAAACGGGTCAAATAATTACGACTGCCATTGGTGGTCGAGATGGACAACCGAAGCGGACAATCTCATACATGGCAGAACGTGTGGTTGGTACTGGTTCTTTCGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACCGGTGAAGCGGTTGCAATAAAGAAAGTCTTGCAAGACAAGAGATATAAAAATAGGGAACTCCAGGTCATGCGTATGCTGGACCATACTAATGTTCTTAAGCTAAAGCACTGTTTCTATTCAACGGCCGAAAAAGATGAGTTGTACCTTAACCTAGTTTTGGATTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGGATGCACCAACATATGCCTATCATTTATATACAACTGTATACATACCAGATATGCCGTGGTTTAAATTATTTGCATCATGTGGTCGGAGTCTGTCATCGTGACATCAAACCCCAGAATCTGTTGGTTAATCCCCAGAGTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAAATGTTGGTGCCTGGCGAACCCAACATATCATACATATGCTCAAGGTATTATAGAGCTCCAGAACTTATATTTGGCGCAACAGAATACACAACTGCTATTGATATTTGGTCCGCTGGTTGTGTCTTGGCTGAGCTTCTTCTAGGACAGCCAATGTTTCCTGGAGAGAGTGGGATTGATCAGTTGGTAGAGATCATTAAGATTTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAAATAAAAAGCACACCCATGGCACAAGTGGATCTTGTGTCAAGGATGCTTCAATATTCACCAAATCTACGTTGCACTGCTTTGGAAACATGTGCACACCCCTTCTTTGATGATCTGCGAGATCCAAATGCATGCTTGCCAAATGGGCGACCACTTCCTCCTTTGTTTGATTTCACAGCTCAAGAACTGGCTGGCGCACCTGACGAGTTGCGCCGACGTCTCATTCCTGAGCATGCAATGAGTTAA 1344 0.4137 MNMMRRLKSIASGRTSISSDPTEEKMNVETNPVERGGKDQEQHVDASKETTAVTLNSNVSTLARTEKSGYDQLPKELHEMKIRDDKAKNNNEKDMETTIVNGNGTETGQIITTAIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLKLKHCFYSTAEKDELYLNLVLDYVPETVYRVSKHYVRMHQHMPIIYIQLYTYQICRGLNYLHHVVGVCHRDIKPQNLLVNPQSHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGQPMFPGESGIDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKSTPMAQVDLVSRMLQYSPNLRCTALETCAHPFFDDLRDPNACLPNGRPLPPLFDFTAQELAGAPDELRRRLIPEHAMS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ropsun57g00001 447 MobiDBLite consensus disorder prediction 27 46 - -
Ropsun57g00001 447 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 92 445 - -
Ropsun57g00001 447 ProSiteProfiles Protein kinase domain profile. 128 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ropsun57g00001 447 SMART serkin_6 128 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ropsun57g00001 447 Gene3D Phosphorylase Kinase; domain 1 113 207 - -
Ropsun57g00001 447 FunFam Glycogen synthase kinase-3 beta 112 207 - -
Ropsun57g00001 447 ProSitePatterns Protein kinases ATP-binding region signature. 134 158 IPR017441 GO:0005524
Ropsun57g00001 447 FunFam Shaggy-related protein kinase kappa 208 446 - -
Ropsun57g00001 447 CDD STKc_GSK3 123 405 IPR039192 -
Ropsun57g00001 447 MobiDBLite consensus disorder prediction 9 26 - -
Ropsun57g00001 447 SUPERFAMILY Protein kinase-like (PK-like) 127 427 IPR011009 -
Ropsun57g00001 447 Pfam Protein kinase domain 128 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ropsun57g00001 447 Gene3D Transferase(Phosphotransferase) domain 1 208 446 - -
Ropsun57g00001 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Ropsun57g00001 447 MobiDBLite consensus disorder prediction 1 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ropsun57g00001 134 405 Core Cell Cycle Gene Families AT1G76540 35.517 5.99e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Ropsun57g00001 Pkinase 1.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ropsun57g00001 K00924 - gmx:100786458 799.66