Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02719 ATGCTAACGGTTTTCCATTGTTTTGGTCACTGTTTATGTCTCCACTTTGAAACTTTTCAGCTTGGCATGGCTCCTGTTTACATGGCATTTCTCCGATTCATGGGTGATGAAAGAGAGGCCAGGAACTACAGCTACAGCTCGGAGGTGGGAGGAAGGAGAAGCCATCAATGGAGACCCAATGGGAGAGAGCTCTTGCTATACTTTCCACGTGGTGGTGTCACTTGCACTGATGCTCCCATGGTGCAAGTGCTCCTGGCTAGCTTTCTCGGGGTTGCACACTCTGGCCAGTCTCTTCAACATGTTCTGTGGTAG 312 0.4968 MLTVFHCFGHCLCLHFETFQLGMAPVYMAFLRFMGDEREARNYSYSSEVGGRRSHQWRPNGRELLLYFPRGGVTCTDAPMVQVLLASFLGVAHSGQSLQHVLW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02719 103 Pfam Seven in absentia protein family 1 53 IPR018121 GO:0005737|GO:0006511|GO:0007275
Rops9g02719 103 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 64 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02719 Rops-Chr9 51253664 51253975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02719 1 58 C3H Transcription Factor Family AT2G41980 71.186 1.60e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02719 K04506 - gmx:100792687 101.679