LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g02694	ATGGTTCAATCACTTGCTCCCAATGTTCCCAAGAAGCATAACCTTGATCCTCATATTGGATTGGAATTTGATTCTTTTACGGATGCTAAAATTTTCTACACAACATTTGCTAAGGAAGAGGGATTTGGAATTCATACCCGTTCAAGTAAGAAAAATTTATGTATACTTGTATGCTCTAATGCTGGTAAACATATAGTCAATAATGGTAGCAACGAAGAAAGCAATACTATTACAGGAAAAATTAAGAAAGGGTGCTCAACTTCAAGAACTGATTGTAAGGCCTCACTTATTGTTTCAAAAGCATGGAAGAGACATAACTGGGCTATCATTGGTTTTAACAATGTTCATAATCATGATATGATAAGCCTCAAGAGTGTGAACTATCTTAGATGCCACAAAAAGATGAGTGCAGCGACAAAGAACCTTGTTGAAAAGTTTGATCAAGAGGGCTTACCTACCGGAAAAGTTGTTACAATGTTTCACAATGAAGGCTCATCCTTTTCTAATAGAGATTATTGGAATCATCTTAGAGATCTTCGATGTAGGAATTTAGAGGTGGGAGATGCTCAAGTTGTTCTTAACTTCTGTAAACAAAAGCAGGCTGAGAATCCAAGTTTCTTTTATGCAATACAATGTGATAATGATGCTAGAATGATCAATTTTTTTGGATAG	672	0.3527	MVQSLAPNVPKKHNLDPHIGLEFDSFTDAKIFYTTFAKEEGFGIHTRSSKKNLCILVCSNAGKHIVNNGSNEESNTITGKIKKGCSTSRTDCKASLIVSKAWKRHNWAIIGFNNVHNHDMISLKSVNYLRCHKKMSAATKNLVEKFDQEGLPTGKVVTMFHNEGSSFSNRDYWNHLRDLRCRNLEVGDAQVVLNFCKQKQAENPSFFYAIQCDNDARMINFFG*	224

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g02694	223	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	11	168	-	-
	Rops9g02694	223	Pfam	FAR1 DNA-binding domain	32	120	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g02694	Rops-Chr9	50671798	50672469	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops9g02694		FAR1	1.6e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g02694	-		-	mtr:112422107	310.842