Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02677 ATGATGATGGGTGGTCTATACTGGACTGTAGGGGCTGTGGAGGACGTCGGGGATGAGGTCATGGAGATCCTGAAGGAATACGAAAGTGGCGAGGATGCAATGGGTAGAGCTCATCGAATTGGGCAACAAGAAGTTGTTAACATATATAGATTTGTGACAAGCAAAAGTGTTGAGGAAGATATTTTGGAACGTGCTAAAAAGAAGATGGTTCTTGACCACTTGGTAATCCAAAAACTAAATGCAGAGGGTAGACTGGAGAAGAAAGAAGCAAAAAAAGGTGGAAGTTATTTTGACAAAAATGAGCTGTCAGCAATCTTAACATTTGGAGCCGAGGAGCTTTTTAAGGAAGAAAGAAATGATGAAGAAAGCAAGAAACGACTTTTAAGTATGGACATAGATGAGATTCTCGAAAGGGCAGAGAAGGTTGAAGAGAAGGAAAATGACGAAGAGCACGCACATGGTGTTCTTAAGTCATGGCCACATCCTGTCCAATACCGGACAAAGCTTTGCAAGGACGAGACTGGTTGCTCTAGAAAAGTTTGCTCCTTTGCTCATAAACCTGAGGAGCTACGCTGGTTTATGCTTGCACTGGGTCAGCCATGCCTTCACCAAATCTTATTCGGCTAG 627 0.4322 MMMGGLYWTVGAVEDVGDEVMEILKEYESGEDAMGRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILTFGAEELFKEERNDEESKKRLLSMDIDEILERAEKVEEKENDEEHAHGVLKSWPHPVQYRTKLCKDETGCSRKVCSFAHKPEELRWFMLALGQPCLHQILFG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02677 208 Coils Coil 71 91 - -
Rops9g02677 208 Gene3D - 30 155 IPR027417 -
Rops9g02677 208 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 33 150 - -
Rops9g02677 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 117 IPR027417 -
Rops9g02677 208 Coils Coil 125 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02677 Rops-Chr9 50222549 50224424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02677 150 191 C2H2 Transcription Factor Family AT5G12850 66.667 3.46e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02677 K11367 - gmx:100808039 199.904