Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02676 ATGGGACAAGGAGATTCTGGAAGAGTTTATAAAGGTGAACTCCATGATAGTAGAAGAATTGTGGTGAAAAGAATGAAGTCTGGGGCAATATCTGGGAAAGGTGCAGCAAAATTTAAGTCTGAGTACATGCCTCAAGGGACACTTAGTAGGTATCTTTTCAACTGGCCAGAGGAAGGACTGGAACCACTGGAGTGGAATAGAAGATTGACCATTGCCTTAGATGCAGCAAAGGGTGTTAAACACCTCCATGGCTTGGCCCATCAAAGCTTCTTACACATAGACTTGAAACCATCAAACATTCTCCTTGGAGATGATGATATATACGGTATTGATCTTGACATGTCTTTACCACAAGCGCTTAAGAACTGGCAGACTTATGAAGGTGGAAGTCAAATGGAGTCTTCTTCACTTCCTCCAAGCTTGATAACACAGACAATTATACCTACTCGCCCCTATGGATTTGTCGATTCTTTCACTTCAGCAGATGTGCCCTCTCCATTCCTTTTCTCCCTCTCCCTCTCCCTCCTTCGTCGTCACTCCACTCTCACGGCCGTTACCATGCAAGACATTCACCGTTTCTTAATCGTCACCAGAAGACTCGCAACCTCCGAAACCACCGCCAGCGTTTCCGATTCGAATAAGGCTCTTATCTCTGAGCTGCAAGAAATGGAGGATAAGGTGAGGGAACCAGAATTGGAGAACCGTAAGAGCAAGGCTTACGTGGATGGATGGAAGCAACGTATGGCGGAGACTAGCGTGTTGTTGAAGCAGGTTCAGGAACCAGGTGCGAGAGGTTCATATTTGAAGGATTCAGAGAAAGCGGAGATGTATCGGTTGCATAAGAAGAACCCTGAGGTTTACACTGTTGAAAAGTTAGCTAAGGATTATAGGATTATGAGGCAGAGGGTTCATGCGATTCTATGGCTCAAGGAGCTTGAAGAAGAGGAAGAGAAGAAGCTTGGTCGTCCTCTTGATGATTCCGTTGAGCTCTTGCTTGACACTTTCCCTGAATTCTTTATTTCCCATGACAGGGAGTTCCATGTTGCATCCCTTCCTTACAAACCTGACTTCGAGGTTATACCTGAGGGTTGGGATGGCATTACCAAAGATTTGGATGAGGTTCATTATGAAATATCCAAAAAGGAGGATGAAATGCTTTATAGAGAATTCGTTGAGAAGATGAACTTCAACAAAAAGAAAATGACTGGTCAAGGTGGGAACCCTCCAGTTTCACGTGAAAAAAAACAAGGCACCACGCACATACAGGTTCATGGGTGA 1278 0.446 MGQGDSGRVYKGELHDSRRIVVKRMKSGAISGKGAAKFKSEYMPQGTLSRYLFNWPEEGLEPLEWNRRLTIALDAAKGVKHLHGLAHQSFLHIDLKPSNILLGDDDIYGIDLDMSLPQALKNWQTYEGGSQMESSSLPPSLITQTIIPTRPYGFVDSFTSADVPSPFLFSLSLSLLRRHSTLTAVTMQDIHRFLIVTRRLATSETTASVSDSNKALISELQEMEDKVREPELENRKSKAYVDGWKQRMAETSVLLKQVQEPGARGSYLKDSEKAEMYRLHKKNPEVYTVEKLAKDYRIMRQRVHAILWLKELEEEEEKKLGRPLDDSVELLLDTFPEFFISHDREFHVASLPYKPDFEVIPEGWDGITKDLDEVHYEISKKEDEMLYREFVEKMNFNKKKMTGQGGNPPVSREKKQGTTHIQVHG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02676 425 MobiDBLite consensus disorder prediction 399 425 - -
Rops9g02676 425 SUPERFAMILY Protein kinase-like (PK-like) 2 106 IPR011009 -
Rops9g02676 425 PANTHER MUCIN-LIKE PROTEIN 210 414 - -
Rops9g02676 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Rops9g02676 425 Pfam Eukaryotic mitochondrial regulator protein 267 332 - -
Rops9g02676 425 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g02676 425 Gene3D Transferase(Phosphotransferase) domain 1 48 282 - -
Rops9g02676 425 Pfam Protein tyrosine and serine/threonine kinase 36 127 IPR001245 GO:0004672|GO:0006468
Rops9g02676 425 MobiDBLite consensus disorder prediction 400 425 - -
Rops9g02676 425 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02676 Rops-Chr9 50187852 50192859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02676 1 126 Trihelix Transcription Factor Family AT1G70460 32.692 4.42e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Rops9g02676 Bot1p 7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02676 - - zju:107435088 324.324