Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02668 ATGGCCTCATCCAGTGGAAACTCTAGCATGTCCACTAAATTTCAGAGCTCTGGCTCTGAGGAAGATTTGCAGCTTCTGATGGATCAAAGAAAGAGGAAGAGAAAACAATCTAATCGTGAATCAGCAAAAAGATCTCGGATGAGAAAGCAGAAGCAGTTAGATGATCTCATTGCTGAAGAGGAAAGACTCAGAAAGGAAAACAGTGAAATCCTCACAAGGGTGAACTTCACCACCCAACACTATCTTGAGGTTGAGGCTGAGAATTGCATTCTATGGGCCCAGATGGGTGAACTGAGCCAAAGGCTACAATCACTGAATGATATCATCAACCTAATCAACACAACAACTGGGGTCTACCAAATGGATTGTTATCTAACAACTGCAGATAATTTCATGAATCACATGAACATGCCTTATCTTAACCAACCAATTGTGGCATCTGCAGACATGTTTCAGTGGTGA 462 0.4199 MASSSGNSSMSTKFQSSGSEEDLQLLMDQRKRKRKQSNRESAKRSRMRKQKQLDDLIAEEERLRKENSEILTRVNFTTQHYLEVEAENCILWAQMGELSQRLQSLNDIINLINTTTGVYQMDCYLTTADNFMNHMNMPYLNQPIVASADMFQW* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02668 153 MobiDBLite consensus disorder prediction 1 53 - -
Rops9g02668 153 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Rops9g02668 153 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Rops9g02668 153 FunFam BZIP transcription factor 28 79 - -
Rops9g02668 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Rops9g02668 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 75 IPR004827 GO:0003700|GO:0006355
Rops9g02668 153 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Rops9g02668 153 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Rops9g02668 153 MobiDBLite consensus disorder prediction 1 23 - -
Rops9g02668 153 Coils Coil 39 73 - -
Rops9g02668 153 Gene3D - 28 110 - -
Rops9g02668 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02668 Rops-Chr9 49936903 49938271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02668 26 153 bZIP Transcription Factor Family AT4G34590 54.015 5.72e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops9g02668 bZIP_1 4.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02668 K25786 - gmx:100101889 194.512