Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02659 ATGAGTACATTCCGTTACGGTTCAGTTATTCAACCATCGCCAGTAACAGCAATTCAACATCCACAACAACAACGCTATTATTATTTACCATTTCGCCCTTTACGGTTATCCCCTCTTTCTCTCTCTCCCCCCAACACCTCCAAGGTCGTCACCACCTCTGTTCTGCAACGCGACCTTGGAGTTGAAGTAGCGTCCCCTGACTCCGACGACGCCGTTTCATCACAAAACGAAAACGAACCGATTCAGTTGGAGACACTTGAGCAACACAATGAAGAAGCAGCTCCAATTGTCCTTGCTGATGAAGAAGATAAAGGGAAGAGACTTAGAAAGAAGAAAGAACAAGAAGATAGCAGCTTCGATAACCGCTTCAAGCTCCGTAACGGAAGGGAGGTTTTTGAAGAAAAAGCCTACCTCGTAGGAGTTGAGCGCAAAAATGATGTTCAGGATTCTTTCAGTATAGAAGAATCTCTAAGTGAATTGGAACAGTTAGCTGACACTTCTGGATTATTAGTTGTTGGCTCTACACACCAGAAGCTTAATTCTCCAAACCCTAGGACATACATTGGCTCTGGCAAGGTTTCAGAAATTAAGAGTGCGATTCATGCTTTGGGTGTTGAAACTGTGATCTTTGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAAAAGATTTTTGGTGGGGATGTGAGAGTTTGTGATCGAACCGCTCTCATCCTTGATATATTTAATCAGCGAGCAGCAACACATGAAGCATCTTTACAGGTTTCATTAGCACAGATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCTGGAGGAAAGGTGAAGGGAATGGGAGAAAAACAGATAGAAGTGGACAAGCGTATTTTGCGTAACCAAATTGGTATTCTTAAGAAAGAGCTAGAATCTGTTAGGAAACACAGAAAGCAGTACCGTAACAGGCGTTTTTCAGTACCAGTGCCAGTGGTATCCTTGGTTGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCGATTAACTGGAGCAGATGTTCTTGCTGAGGATAAATTATTTGCAACTTTAGATCCAACTACTAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATCCAGAAGTTACCTACTACACTGGTTGCTGCCTTCAGAGCTACGCTGGAGGAGATATCAGAGTCATCGCTTTTGGTGCATGTGATTGACATCAGTCACCCCCTGGCTGAGCAACAGATAAATGCTGTGGACAGAGTTCTGTCAGAACTAGATGTATCATCAATTCCAAGATTGATGGTCTGGAACAAGGTTGATAAGGCTAGTGATCCCCAGAAAATCAGGCTGGAAGCTGAAAAAAGAGAAGATGTTGTATGCATATCTGCTTTAACTGGCGATGGCTTACCAGAATTCTGTAATGCAGTTCAAGAAAAACTAAAGGACTCCATGGTATGGGTGGAAGCTTTGTTACCATTTGAGAATGGGGACCTTCTCAGCACCATACACCAGGTTGGAATGGTTGAGAAAACTGAATATACGGAGCAAGGGACATATATCAAGGCTCACGTGCCTCTACGTTTTGCAAGATTGCTTACACCCATGAGGCAACTTCATATTCGAAGGCCCTTGAAAATACTATTGAAGGATGGCAAAGCCAATCTTCTTGTAATAGCTTTCCTCTCAGTTACACTCTCTCAGGCTCACCCTGGCTTCCATTTTGGTTGGGGTGGTGGTCATGGTGGAACTGGGGGAATGTCTTTTGGTCTTTCTCCTCAATTCTATCAATTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTGTTGGAGAAGGCCATTGCTAAGGATATGAGAATGGCTGCTTCTCTTCTTAGACTTCACTTTCATGACTGCTTCGTGCAGGGCTGCGATGCATCAATTTTGTTGGATGATAGCAAGACAATAGTAAGTGAAAAAAATTCTGGACCTAACAAAAATTCCGTCAGAGGTTTTGAAGTGATTGATGAGATCAAATCTAAGTTGGAAGAAGCATGTCCTCAAACTGTCTCTTGTGCAGACATTGTTGCCCTTGCTGCCAGGGGCTCCACTATTCTTAGTGGAGGACCCAATTGGGAGCTTCCATTAGGCAGGAGAGACTCAAAAACAGCAAGCCTACGTGGCTCAAACAAAAACATTCCCCCACCAAATGCCACCATTGAAAGTCTCCAAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGAGCTCATACCGTTGGGGTGGCAAGATGTGCAACATTCAAGCAGAGACTATACAACCAAAATGGAGACAACCAACCAGATGGGAATCTAGAAAAATCCTTTTACTTTGGTTTGAAGACAGTGTGCCCAAAATCAGGTGGTGACAACAAGATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACCTATTTCAAACTCTTACTTAGGGGAAAAGGGTTGCTTAATTCAGATGAAGTGCTTCTTATGGGGAGTGTTAAGGAGACTCGTGAACTTGTCAAGAAATATGCACATGATGAGAACCTCTTCTTTGAGCAATTTGCCATGTCCATGATCAAGATGGGGAACCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCGCCGGGTTAATTAA 2709 0.433 MSTFRYGSVIQPSPVTAIQHPQQQRYYYLPFRPLRLSPLSLSPPNTSKVVTTSVLQRDLGVEVASPDSDDAVSSQNENEPIQLETLEQHNEEAAPIVLADEEDKGKRLRKKKEQEDSSFDNRFKLRNGREVFEEKAYLVGVERKNDVQDSFSIEESLSELEQLADTSGLLVVGSTHQKLNSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVIDISHPLAEQQINAVDRVLSELDVSSIPRLMVWNKVDKASDPQKIRLEAEKREDVVCISALTGDGLPEFCNAVQEKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARLLTPMRQLHIRRPLKILLKDGKANLLVIAFLSVTLSQAHPGFHFGWGGGHGGTGGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSKTIVSEKNSGPNKNSVRGFEVIDEIKSKLEEACPQTVSCADIVALAARGSTILSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIESLQTFFKRQGLDEVDLVALSGAHTVGVARCATFKQRLYNQNGDNQPDGNLEKSFYFGLKTVCPKSGGDNKISPLDFGSPRMFDNTYFKLLLRGKGLLNSDEVLLMGSVKETRELVKKYAHDENLFFEQFAMSMIKMGNLRPLTGFNGEVRKNCRRVN* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02659 902 ProSiteProfiles Plant heme peroxidase family profile. 600 902 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 329 502 IPR027417 -
Rops9g02659 902 FunFam GTPase HflX 328 497 - -
Rops9g02659 902 Pfam 50S ribosome-binding GTPase 331 449 IPR006073 GO:0005525
Rops9g02659 902 FunFam Predicted protein 148 270 - -
Rops9g02659 902 SUPERFAMILY Heme-dependent peroxidases 600 902 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 Gene3D - 147 246 IPR042108 -
Rops9g02659 902 Pfam HflX C-terminal domain 461 529 IPR045498 -
Rops9g02659 902 Pfam GTP-binding GTPase N-terminal 154 243 IPR025121 -
Rops9g02659 902 FunFam Peroxidase 604 746 - -
Rops9g02659 902 Hamap GTPase HflX [hflX]. 157 520 IPR016496 GO:0005525
Rops9g02659 902 ProSitePatterns Peroxidases proximal heme-ligand signature. 760 770 IPR019793 -
Rops9g02659 902 NCBIfam GTPase HflX 136 491 IPR016496 GO:0005525
Rops9g02659 902 Pfam Peroxidase 619 866 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 Coils Coil 302 322 - -
Rops9g02659 902 Gene3D - 605 902 - -
Rops9g02659 902 PRINTS Plant peroxidase signature 712 727 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 834 851 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 634 654 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 610 629 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 876 889 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 674 687 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 693 703 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 759 771 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Plant peroxidase signature 818 833 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Haem peroxidase superfamily signature 694 711 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Haem peroxidase superfamily signature 820 835 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Haem peroxidase superfamily signature 632 646 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Haem peroxidase superfamily signature 760 775 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 PRINTS Haem peroxidase superfamily signature 712 724 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops9g02659 902 Gene3D - 328 496 IPR027417 -
Rops9g02659 902 Gene3D Peroxidase, domain 2 738 882 - -
Rops9g02659 902 FunFam Peroxidase 738 881 - -
Rops9g02659 902 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 329 495 IPR030394 GO:0005525
Rops9g02659 902 NCBIfam small GTP-binding protein domain 330 483 IPR005225 GO:0005525
Rops9g02659 902 ProSitePatterns Peroxidases active site signature. 632 643 IPR019794 GO:0004601
Rops9g02659 902 Pfam GTP-binding GTPase Middle Region 246 323 IPR032305 -
Rops9g02659 902 CDD secretory_peroxidase 600 901 IPR033905 GO:0004601|GO:0042744
Rops9g02659 902 CDD HflX 288 491 IPR030394 GO:0005525
Rops9g02659 902 Gene3D - 247 314 - -
Rops9g02659 902 PANTHER GTP-BINDING PROTEIN HFLX 88 538 IPR016496 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02659 Rops-Chr9 49772538 49801443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02659 566 902 Peroxidase AT1G44970 72.404 2.87e-174 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02659 K03665 - gmx:100803039 823.542