Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02635 ATGGATGACCCTGCACACCGTGAAAATGGAAGGCACAAAGCAGATCAATATAAACCTGCTCAGGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAGCAGATTATGGCAATTATGGCTGAACGAGATGCAGCCATTCAAGAAAGAAATCTTGCCCTTTCTGAGAAAAAGGCAGCACTTGCAGAACGTGACATGGCTCTCCTGCAGCGAGATAGTGCAATTGCTGAAAGAAACAATGCATTAATGGAACGAGATAGTGCAATTGCAACCCTACAATTTCGAGAAAACTCCTTGACCAACGGTAGTATGTCATCATGCCCTCCTGGATGCCAAATCTCAAGGGGAGTCAAGCATATACATCATCTGCCACAACAAGTAAACCATTTACCTAACATGGGTGATGCTTCTTATATCACAAGGGAAATGCACACAAGTGATGTTCTCCCAGAAGCACCCGTGCCTTCAGAGGCTGGGAAGTCTCGGCGGGCCAAACGACCAAAGGAAGGTAAGTCGGTTTCACCTAACAAGAAGACTCCAAAAACTACTAGAAAGGTCAAGAGGGAGATCGAAGATGTAAATAAGATGATGTTTGCCAATAGCAAGACACATGAGTGGAAGAGTAGTCAGGAAATCATAAACGGAGACGATCTTAACAAGCAGTTAGCAGTGTCAAAGGCTGATTGGAAAACTCAAGACTTGGCATTAAATCAGGTTGCATATGATGAGTCAACCATGCCAGCACCAGTGTGTTCTTGTACTGGTGTTCCAAGACAATGCTACAAATGGGGAAATGGAGGTTGGCAATCTGCTTGTTGCACAACTAGCTTATCAATGTATCCACTTCCAGCAGTGCCAAACAAGAGGCATGCTCGTGTAGGAGGTAGAAAAATGAGTGGAAGTGCTTTCAATAAACTGCTTAGCAGGCTAGCAGCAGAAGGGCATGATCTGTCAAACCCAGTTGACCTTAAAGACCATTGGGCCAAACATGGTACAAATCGATATATCACAATAAAGTAG 1017 0.4435 MDDPAHRENGRHKADQYKPAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMALLQRDSAIAERNNALMERDSAIATLQFRENSLTNGSMSSCPPGCQISRGVKHIHHLPQQVNHLPNMGDASYITREMHTSDVLPEAPVPSEAGKSRRAKRPKEGKSVSPNKKTPKTTRKVKREIEDVNKMMFANSKTHEWKSSQEIINGDDLNKQLAVSKADWKTQDLALNQVAYDESTMPAPVCSCTGVPRQCYKWGNGGWQSACCTTSLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02635 338 MobiDBLite consensus disorder prediction 1 15 - -
Rops9g02635 338 PANTHER - 1 338 IPR010409 -
Rops9g02635 338 MobiDBLite consensus disorder prediction 144 185 - -
Rops9g02635 338 MobiDBLite consensus disorder prediction 157 174 - -
Rops9g02635 338 MobiDBLite consensus disorder prediction 1 22 - -
Rops9g02635 338 Pfam GAGA binding protein-like family 1 338 IPR010409 -
Rops9g02635 338 Coils Coil 51 78 - -
Rops9g02635 338 SMART GAGA_bind_2 1 338 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02635 Rops-Chr9 49370924 49373928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02635 65 338 BBR or BPC Transcription factor family AT5G42520 63.051 3.69e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Rops9g02635 GAGA_bind 6.6e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02635 - - gmx:100783502 585.489