Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02632 ATGGTGAAATCTCGCTCCTGCTTCAGATTAATTACATGCGGCGGTGATGCGGCGGAGAAAGATGATCACCAAGTAGTATCCGAGATCAAGGACTCTAATGATAAAAGTGGTTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAACAGAGAACCCATCTTCTGCAAATAAGGAGAGTTCAGAATGTACAAGTGTTAATTTTCAATCACAGGCTGATGATCCTAATGTTGTTGAGAAGATTTATACAACAAATTTCTCTGATGAGAAGCCCCAGTTACCATCCGTTGCAAGCACAGAAATGTTGGAAAAAATTGTCACGGAAACGGTGGGTAAGGTTGATGTTGATCCTCCAGAATCTGTTATCATCATCATCCAGGCTGCCATTAGAGGATTTTTGGCTCAGAGAGCACTCCTAAAAAATAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGCGGGCACTTGGTCAGGAGGCATGCCGTAGGAACACTGCGATGTGTTCAAGCTATTGTTAAAATGCAGCTCCTTGTGCGAGCTCGACATGCTCAGCAGTCACATTCAGAAGATCCTTTAAATCACAAGGGTAATGAACATCAGGTGACCAAACCAAATGTGACACACACTTCTGTAGAAAAGATTCTCAGCAATAAGTTTGCTCGTCAGCTGTTGGAGTCAACACCAAAAAACAAACCTATCCATGTCAAATGTGATCCTGCGAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGATGGATGTCTGTGTCATCAAAAGATTCTGCAGAGCACAGAAATCCTATTTGTATATCAGAACAATCTGATGAAACCAATGATAGCACTCATGCATCTCAATTGGAAACAAGTATTCCATCTGAAGTTTCTCTTCAGTTAGCTGACTCAAAGCCTACTGTTGGGGATTCACCTCTGCTGCCTGAGGATGAAGAGAAGACCACTACTTATGATGATAACAACTTAAACTTTCAAGCAAACCCCCCTACATCTTCTCTTGTAAAAGATAACATGGAACAGGCTCCTCCTGAAGAGATTATTACAGATGATGTTAAAGTAACCTCAACTGAAATTGATCCTTTCCAAAATAAAAAAGTGGAATCAGATGCAAGTGTCCCGCTGGAGCCTAGTTCTCCTCAGAAACTTGAAATTGACGGTGAACGGTGCAAACAATCTATGGAAACATTTGTCTCAGATCAACTAGAGACTGAAGGAAAGAAATTTGTACATGGATCAGGGAAGATCGGTAATCCTGCATTTATTGCCGCACAATCAAAATTTGAAGAGCTGAGTTCAGTGGCAAATTCAGGTAGGTCAAGCAGTTTGTCCAATCAAGAAGCATCAGTTGTATCGCAGGCAGACACCTCTTCAGTTGTCACAGATACTGCATGTGGATCAAAAGAGTTATTCTCATCAGAGAATTCTGCTCCCTATCCTTCTAGAATTGGTGGTTCTGAATGTGGTACTGAAATCTCTATCTCTTCAACTCTTGATTCACCTGACAGATCTGAGGTTGGGACTACGGAAAATGGGCATGATGCCAAAGATTTAGTAGAAGGGATAGGTCATCCTGAAAACAAGATCGATCATAGTGTTGAGGCCAATAATCTGTTCGCAACTCCAACTTCTACCTTACCTATCCCTGATTCAGATCAATCAGAAATTGTTAATGACGTCACTGGCGATGTGATTAATTCAGTGGTTCTTGAGGACTCCAAAGACTCTGATGTTGTTGAGCCTGAGAAAAATGCATCTGACCCATCGAGAGAACAGACAGAGACTGTCCTGCAGGATTTCAAGTTGTCTCCAGAAGCTTCACGAGGAAGCCATTTGACCATCCCTGAATCTCAAGGAACACCTTCAAGTCAGGTATCTGTGAAAGCTAAAGAGAGTAAAATCAACAAGAGTGGATCAAAGAATAAACGCAGAATACTGTCTGTTGGTAGCAAGTCTCCTGCAAATGCAAATCATGATTCAGGTTCAAGAGGTAGTAGAGAACAATTGCCTAAAGATCAGCTAAATGGAAAGAGGCGCAATTCTTTTGGCTCAGTAAAACCTGATCACATTGATCAAGAGCCTAGAGATAATAGTAACAACAACTCTCTTCCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCAAAGATAAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTACATGACCAAGACAGTCATGTTAAGAAGAGACATTCCTTACCTGGTGCAACTGGTAGGCAGGGTTCTCCACGCATCCAACGACCAACGTCTGGCACAAGAGGAAATGGCATACATGCTCTTAATGAGAGAAAATGGCAGAGGTAA 2352 0.4201 MVKSRSCFRLITCGGDAAEKDDHQVVSEIKDSNDKSGWSFRKRSARHRVLSNTVITENPSSANKESSECTSVNFQSQADDPNVVEKIYTTNFSDEKPQLPSVASTEMLEKIVTETVGKVDVDPPESVIIIIQAAIRGFLAQRALLKNKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQLLVRARHAQQSHSEDPLNHKGNEHQVTKPNVTHTSVEKILSNKFARQLLESTPKNKPIHVKCDPAKADSAWKWLERWMSVSSKDSAEHRNPICISEQSDETNDSTHASQLETSIPSEVSLQLADSKPTVGDSPLLPEDEEKTTTYDDNNLNFQANPPTSSLVKDNMEQAPPEEIITDDVKVTSTEIDPFQNKKVESDASVPLEPSSPQKLEIDGERCKQSMETFVSDQLETEGKKFVHGSGKIGNPAFIAAQSKFEELSSVANSGRSSSLSNQEASVVSQADTSSVVTDTACGSKELFSSENSAPYPSRIGGSECGTEISISSTLDSPDRSEVGTTENGHDAKDLVEGIGHPENKIDHSVEANNLFATPTSTLPIPDSDQSEIVNDVTGDVINSVVLEDSKDSDVVEPEKNASDPSREQTETVLQDFKLSPEASRGSHLTIPESQGTPSSQVSVKAKESKINKSGSKNKRRILSVGSKSPANANHDSGSRGSREQLPKDQLNGKRRNSFGSVKPDHIDQEPRDNSNNNSLPHFMQATESARAKINANNSPRSSPDVHDQDSHVKKRHSLPGATGRQGSPRIQRPTSGTRGNGIHALNERKWQR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02632 783 Gene3D - 126 165 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 580 596 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 513 530 - -
Rops9g02632 783 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Rops9g02632 783 MobiDBLite consensus disorder prediction 617 639 - -
Rops9g02632 783 ProSiteProfiles IQ motif profile. 146 175 IPR000048 GO:0005515
Rops9g02632 783 MobiDBLite consensus disorder prediction 440 530 - -
Rops9g02632 783 Pfam Protein of unknown function (DUF4005) 699 752 IPR025064 -
Rops9g02632 783 MobiDBLite consensus disorder prediction 758 772 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 648 670 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 576 783 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 495 512 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 188 202 - -
Rops9g02632 783 Pfam IQ calmodulin-binding motif 128 143 IPR000048 GO:0005515
Rops9g02632 783 Pfam IQ calmodulin-binding motif 148 165 IPR000048 GO:0005515
Rops9g02632 783 MobiDBLite consensus disorder prediction 703 734 - -
Rops9g02632 783 SMART iq_5 123 145 IPR000048 GO:0005515
Rops9g02632 783 SMART iq_5 146 167 IPR000048 GO:0005515
Rops9g02632 783 PANTHER IQ-DOMAIN 5-RELATED 32 756 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 275 333 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 440 487 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 275 306 - -
Rops9g02632 783 MobiDBLite consensus disorder prediction 187 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02632 Rops-Chr9 49335936 49342104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02632 118 783 IQD Protein Family AT1G19870 37.700 1.09e-100 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02632 - - aprc:113847201 1047.73