Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02625 ATGTCAGCGAAATGCAGCAAAATCCGCCACATTGTTCAGCTCCGCCAGATGCTACGACGGTGGCGCAACAAGGCACGCATGTCATCAGCCAATCGTGCACCGTCCGATGTCCCCGCCGGACACGTGGCGGTGTGTGTGGGTGCCAACTACACCAGATTTGTAGTGCGCGCGACGTACCTTAACCACCCCGTTTTCAAGAAGCTTCTAGTTCAAGCAGAAGAAGAGTACGGTTTCACAAACCATGGACCCTTGGCCATTCCTTGCGATGAAGCGCTTTTTGAAGAGGTTCTCCGGTTCATTTCCCGGTCCGAACCGGATAACTCGATCCGGTTGGAGGATTTTCAGAGGTACTGCCACGTGGGCATCAGGAGCAACCTTGACTTATGGCCCGAATCTCGACCGCTCCTTCATTAA 414 0.5386 MSAKCSKIRHIVQLRQMLRRWRNKARMSSANRAPSDVPAGHVAVCVGANYTRFVVRATYLNHPVFKKLLVQAEEEYGFTNHGPLAIPCDEALFEEVLRFISRSEPDNSIRLEDFQRYCHVGIRSNLDLWPESRPLLH* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02625 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 96 IPR003676 GO:0009733
Rops9g02625 137 Pfam Auxin responsive protein 13 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02625 Rops-Chr9 49215403 49215816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02625 3 136 Calmodulin-binding Proteins AT4G34750 52.448 2.07e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02625 K14488 - cave:132190292 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02625 9 49215403 49215816 Rops10g02455 10 42909136 42909555 PCT