Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02608 ATGGCTCTCTCTAAGCTTCTAGTTGCTTCCCTTCTTGCATCACTTCTCCTTCTTCATATTGTTGATGCAAATGATCAACCGGCATACACGCAAACACAGGGTTCTCTTCTTCAGCAAATAGATTGTAATGGAGCATGTGCTGCAAGGTGCCGTTTATCATCTCGTCCACGCCTTTGCCAAAGAGCCTGTGGAACTTGTTGTAAACGCTGCAACTGTGTGCCACCTGGCACTGCTGGTAACCAAGAAGTGTGTCCCTGCTATGCAAGCTTGACTACCCATGGTGGCAAACATTGTGTTGGTGCTTGCAATGGGAGGTGCCACTTATCATCAAGGCCAAATCTATGTAATAGAGCATGTGGGACGTGCTGTCAACGTTGCAATTGTGTTCCTCCGGGTACTTCTAGTCACTATGAAGAATGCCCTTGCTATGCCAACATGACCACTCATGGTGGCAGGCTCAAATGCCCTTAA 471 0.4756 MALSKLLVASLLASLLLLHIVDANDQPAYTQTQGSLLQQIDCNGACAARCRLSSRPRLCQRACGTCCKRCNCVPPGTAGNQEVCPCYASLTTHGGKHCVGACNGRCHLSSRPNLCNRACGTCCQRCNCVPPGTSSHYEECPCYANMTTHGGRLKCP* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02608 156 Pfam Gibberellin regulated protein 41 96 IPR003854 -
Rops9g02608 156 Pfam Gibberellin regulated protein 97 156 IPR003854 -
Rops9g02608 156 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 5 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02608 Rops-Chr9 48877618 48878560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02608 - - gmx:100500115 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02608 9 48877618 48878560 Rops10g02468 10 43134601 43135495 PCT