Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02593 ATGGTTCATTTTAAGAAGCTCCTTTCTTCTTCTCCTCGTCATATTCTCCCTTTCATATTATTATTACTTGTTTCCTGCAAAACAGAGGCTCGGCTGAAACTACCACCAAATGTTTCGGTTCCAGCAGTGTTTGTGTTTGGAGATTCGATCATGGACACAGGAAACAATAACAACAGAAGAACAGTTGCTCGTTCTAATTTCCCTCCATATGGAAGAGACTTTGAGGGAGGGATCCCAACTGGCCGATTTAGTAATGGAAAGGTTCCATCAGACCTCATAGTTGAAGAGTTGGGCATTAAGGAGCTTCTTCCGGCATATTTGAGTCCAAAACTTCAACCTAGTGATTTGGTCACTGGTGTCTGCTTTGCAGCTGGTGGCTCAGGATATGATCCTTTGACATCCACATTAGAGTCATCTATATCGTTTCCCGGCCAACTAGAACTGTTCAAAGAATACATAGGGAAGCTAAAAGGACTAGTTGGAGAGGACAGAACAAATTTCATCATAGCCAACAGTCTTTTCATTGTGGTAGGAGGCAGCAGTGACATTTCTAACACATATCGCATTAGACAACTACAATATGATGTTCCTGCTTATGCTAATCTTTTGGTCAATTCAGCTTCTAATTTCTTAAAGGAAATAAATCAATTAGGTGCACGAAGGATTGGAATATTCAGTGCGCCACCAATTGGGTGTGTGCCATTTCAGAGAACAGTGGGTGGAGGAATCACAAAAAGATGTGCAGAAAAGCCCAATGAGGTAGCCAAGTTATTTAACAGCAAACTGTCAAAGGAGCTGGATTCACTTAACAGGAACTTTCCCAATAGCAGGAATGTTTTCATTGATGTTTACAACCCTCTGCTTGATGTTATCGAAAACTACCAAAAATACGGCTATAAAGTTGGAGACACAGGATGCTGTGGCACAGGCAGAGTAGAGGTCGCGATATTATGCAACCGTTTCGATTCCACGTGTCCCAATGTTCTTGATTATGTTTTTTGGGACAGTTTTCACCCTACAGAGAGCGTTTACAAAAAGCTTATAGCTTCTATTCTTCAAAAATATCTGTACCAGTTCGTGTGA 1083 0.4109 MVHFKKLLSSSPRHILPFILLLLVSCKTEARLKLPPNVSVPAVFVFGDSIMDTGNNNNRRTVARSNFPPYGRDFEGGIPTGRFSNGKVPSDLIVEELGIKELLPAYLSPKLQPSDLVTGVCFAAGGSGYDPLTSTLESSISFPGQLELFKEYIGKLKGLVGEDRTNFIIANSLFIVVGGSSDISNTYRIRQLQYDVPAYANLLVNSASNFLKEINQLGARRIGIFSAPPIGCVPFQRTVGGGITKRCAEKPNEVAKLFNSKLSKELDSLNRNFPNSRNVFIDVYNPLLDVIENYQKYGYKVGDTGCCGTGRVEVAILCNRFDSTCPNVLDYVFWDSFHPTESVYKKLIASILQKYLYQFV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02593 360 CDD SGNH_plant_lipase_like 41 355 IPR035669 -
Rops9g02593 360 PANTHER GDSL ESTERASE/LIPASE EXL3 24 349 - -
Rops9g02593 360 FunFam GDSL esterase/lipase APG 32 356 - -
Rops9g02593 360 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Rops9g02593 360 Pfam GDSL-like Lipase/Acylhydrolase 43 348 IPR001087 GO:0016788
Rops9g02593 360 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Rops9g02593 360 Gene3D SGNH hydrolase 33 356 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02593 Rops-Chr9 48610574 48615789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g02593 37 353 Pollen Coat Proteome AT1G75910 40.308 1.64e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g02593 - - gmx:102667991 592.038